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Cluster: CGMR079737_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_83343 k141_83343_2 1257 2927 + 3.A.1.106.12
pfam k141_83343 k141_83343_3 2934 3488 + Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8
TC k141_83343 k141_83343_4 3485 4204 + 3.A.1.122.14
TC k141_83343 k141_83343_5 4224 5486 + 3.A.1.122.2
TC k141_83343 k141_83343_6 5490 6734 + 3.A.1.122.1
pfam k141_83343 k141_83343_7 6828 7931 + HlyD_3 | HlyD_D23
CAZyme k141_83343 k141_83343_8 8522 9793 + GT4
CAZyme k141_83343 k141_83343_9 9931 10707 + GT2
CAZyme k141_83343 k141_83343_10 10993 11943 - CBM50
Gene ID: k141_83343_2
Type: TC
Location: 1257 - 2927 (+)
Gene ID: k141_83343_3
Type: pfam
Location: 2934 - 3488 (+)
Gene ID: k141_83343_4
Type: TC
Location: 3485 - 4204 (+)
Gene ID: k141_83343_5
Type: TC
Location: 4224 - 5486 (+)
Gene ID: k141_83343_6
Type: TC
Location: 5490 - 6734 (+)
Gene ID: k141_83343_7
Type: pfam
Location: 6828 - 7931 (+)
Gene ID: k141_83343_8
Type: CAZyme
Location: 8522 - 9793 (+)
Gene ID: k141_83343_9
Type: CAZyme
Location: 9931 - 10707 (+)
Gene ID: k141_83343_10
Type: CAZyme
Location: 10993 - 11943 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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