Cluster: CGMR079671_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079671
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_57872 | k141_57872_2 | 855 | 2237 | - | 4.A.1.2.11 |
| CAZyme | k141_57872 | k141_57872_3 | 2250 | 3728 | - | GH1 |
| TF | k141_57872 | k141_57872_4 | 3891 | 4883 | + | HTH_AraC | HTH_AraC |
| TC | k141_57872 | k141_57872_5 | 5023 | 6408 | - | 3.A.1.15.7 |
Gene ID: k141_57872_2
Type: TC
Location: 855 - 2237 (-)
Type: TC
Location: 855 - 2237 (-)
Gene ID: k141_57872_3
Type: CAZyme
Location: 2250 - 3728 (-)
Type: CAZyme
Location: 2250 - 3728 (-)
Gene ID: k141_57872_4
Type: TF
Location: 3891 - 4883 (+)
Type: TF
Location: 3891 - 4883 (+)
Gene ID: k141_57872_5
Type: TC
Location: 5023 - 6408 (-)
Type: TC
Location: 5023 - 6408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900548255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.