Cluster: CGMR079671_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079671
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_49309 | k141_49309_35 | 43909 | 46236 | - | 9.A.8.1.6 |
| TC | k141_49309 | k141_49309_36 | 46360 | 46581 | - | 9.A.8.1.6 |
| STP | k141_49309 | k141_49309_37 | 46621 | 46863 | - | FeoA |
| STP | k141_49309 | k141_49309_38 | 47053 | 47301 | - | PTS-HPr |
| TC | k141_49309 | k141_49309_39 | 47723 | 49186 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | k141_49309 | k141_49309_40 | 49340 | 49795 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_49309 | k141_49309_41 | 49799 | 52807 | - | GH2 |
Gene ID: k141_49309_35
Type: TC
Location: 43909 - 46236 (-)
Type: TC
Location: 43909 - 46236 (-)
Gene ID: k141_49309_36
Type: TC
Location: 46360 - 46581 (-)
Type: TC
Location: 46360 - 46581 (-)
Gene ID: k141_49309_37
Type: STP
Location: 46621 - 46863 (-)
Type: STP
Location: 46621 - 46863 (-)
Gene ID: k141_49309_38
Type: STP
Location: 47053 - 47301 (-)
Type: STP
Location: 47053 - 47301 (-)
Gene ID: k141_49309_39
Type: TC
Location: 47723 - 49186 (-)
Type: TC
Location: 47723 - 49186 (-)
Gene ID: k141_49309_40
Type:
Location: 49340 - 49795 (-)
Type:
Location: 49340 - 49795 (-)
Gene ID: k141_49309_41
Type: CAZyme
Location: 49799 - 52807 (-)
Type: CAZyme
Location: 49799 - 52807 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900548255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.