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Cluster: CGMR079671_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_69913 k141_69913_45 51040 52209 - CE9
STP k141_69913 k141_69913_46 52328 53494 - SIS | SIS
TF k141_69913 k141_69913_47 53609 54340 - GntR
TC k141_69913 k141_69913_48 54526 55608 - 4.A.6.1.4
TC k141_69913 k141_69913_49 55598 56398 - 4.A.6.1.4
TC k141_69913 k141_69913_50 56489 56971 - 4.A.6.1.4
pfam k141_69913 k141_69913_51 57008 57289 - YajC
TC k141_69913 k141_69913_52 57289 57732 - 4.A.6.1.16
Gene ID: k141_69913_45
Type: CAZyme
Location: 51040 - 52209 (-)
Gene ID: k141_69913_46
Type: STP
Location: 52328 - 53494 (-)
Gene ID: k141_69913_47
Type: TF
Location: 53609 - 54340 (-)
Gene ID: k141_69913_48
Type: TC
Location: 54526 - 55608 (-)
Gene ID: k141_69913_49
Type: TC
Location: 55598 - 56398 (-)
Gene ID: k141_69913_50
Type: TC
Location: 56489 - 56971 (-)
Gene ID: k141_69913_51
Type: pfam
Location: 57008 - 57289 (-)
Gene ID: k141_69913_52
Type: TC
Location: 57289 - 57732 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_69913_51 vegan > omnivore 1.13078 0.00566

🧭 Explore Read Mapping of CGC

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