Cluster: CGMR079650_CGC3
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR079650
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1036605 | k141_1036605_1 | 2 | 1585 | - | CBM48 |
| TF | k141_1036605 | k141_1036605_2 | 1604 | 2608 | - | LacI |
| CAZyme | k141_1036605 | k141_1036605_3 | 2908 | 4434 | + | GH77 |
| CAZyme | k141_1036605 | k141_1036605_4 | 4460 | 6757 | + | GT35 |
| pfam | k141_1036605 | k141_1036605_5 | 6969 | 8429 | + | Flg_new |
| TC | k141_1036605 | k141_1036605_6 | 8524 | 9813 | + | 3.A.1.1.27 |
| TC | k141_1036605 | k141_1036605_7 | 9880 | 11418 | + | 3.A.1.1.27 |
| TC | k141_1036605 | k141_1036605_8 | 11415 | 12395 | + | 3.A.1.1.27 |
| CAZyme | k141_1036605 | k141_1036605_9 | 12406 | 13983 | + | GH13_36 |
| TC | k141_1036605 | k141_1036605_10 | 13996 | 15885 | + | 3.A.1.1.26 |
| CAZyme | k141_1036605 | k141_1036605_11 | 16173 | 19142 | + | GH3 |
| CAZyme | k141_1036605 | k141_1036605_12 | 19246 | 21171 | + | GH2 |
| TC | k141_1036605 | k141_1036605_13 | 21193 | 22752 | + | 2.A.2.2.1 |
Gene ID: k141_1036605_1
Type: CAZyme
Location: 2 - 1585 (-)
Type: CAZyme
Location: 2 - 1585 (-)
Gene ID: k141_1036605_2
Type: TF
Location: 1604 - 2608 (-)
Type: TF
Location: 1604 - 2608 (-)
Gene ID: k141_1036605_3
Type: CAZyme
Location: 2908 - 4434 (+)
Type: CAZyme
Location: 2908 - 4434 (+)
Gene ID: k141_1036605_4
Type: CAZyme
Location: 4460 - 6757 (+)
Type: CAZyme
Location: 4460 - 6757 (+)
Gene ID: k141_1036605_5
Type: pfam
Location: 6969 - 8429 (+)
Type: pfam
Location: 6969 - 8429 (+)
Gene ID: k141_1036605_6
Type: TC
Location: 8524 - 9813 (+)
Type: TC
Location: 8524 - 9813 (+)
Gene ID: k141_1036605_7
Type: TC
Location: 9880 - 11418 (+)
Type: TC
Location: 9880 - 11418 (+)
Gene ID: k141_1036605_8
Type: TC
Location: 11415 - 12395 (+)
Type: TC
Location: 11415 - 12395 (+)
Gene ID: k141_1036605_9
Type: CAZyme
Location: 12406 - 13983 (+)
Type: CAZyme
Location: 12406 - 13983 (+)
Gene ID: k141_1036605_10
Type: TC
Location: 13996 - 15885 (+)
Type: TC
Location: 13996 - 15885 (+)
Gene ID: k141_1036605_11
Type: CAZyme
Location: 16173 - 19142 (+)
Type: CAZyme
Location: 16173 - 19142 (+)
Gene ID: k141_1036605_12
Type: CAZyme
Location: 19246 - 21171 (+)
Type: CAZyme
Location: 19246 - 21171 (+)
Gene ID: k141_1036605_13
Type: TC
Location: 21193 - 22752 (+)
Type: TC
Location: 21193 - 22752 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UMGS1865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.