Cluster: CGMR079623_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR079623
- CGC Family ID: CGCFAM_02693
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_188231 | k141_188231_2 | 953 | 2404 | + | GH13_32 |
| CAZyme | k141_188231 | k141_188231_3 | 2497 | 4293 | - | GH13_30 |
| TF | k141_188231 | k141_188231_4 | 4326 | 5396 | - | LacI |
| TC | k141_188231 | k141_188231_5 | 5695 | 6963 | + | 3.A.1.1.22 |
| TC | k141_188231 | k141_188231_6 | 7107 | 8297 | + | 3.A.1.1.22 |
Gene ID: k141_188231_2
Type: CAZyme
Location: 953 - 2404 (+)
Type: CAZyme
Location: 953 - 2404 (+)
Gene ID: k141_188231_3
Type: CAZyme
Location: 2497 - 4293 (-)
Type: CAZyme
Location: 2497 - 4293 (-)
Gene ID: k141_188231_4
Type: TF
Location: 4326 - 5396 (-)
Type: TF
Location: 4326 - 5396 (-)
Gene ID: k141_188231_5
Type: TC
Location: 5695 - 6963 (+)
Type: TC
Location: 5695 - 6963 (+)
Gene ID: k141_188231_6
Type: TC
Location: 7107 - 8297 (+)
Type: TC
Location: 7107 - 8297 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Cellulomonadaceae
Genus
Timonella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.