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Cluster: CGMR079623_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_135154 k141_135154_14 13428 14315 - 3.A.1.17.13
TC k141_135154 k141_135154_15 14308 15111 - 3.A.1.17.5
pfam k141_135154 k141_135154_16 15112 16272 - NMT1
CAZyme k141_135154 k141_135154_17 16658 18907 - GH42
CAZyme k141_135154 k141_135154_18 19307 23326 - GH136
TC k141_135154 k141_135154_19 23707 25275 + 2.A.1.3.3
TC k141_135154 k141_135154_20 25348 28749 - 2.A.6.5.5
STP k141_135154 k141_135154_21 28753 29406 - TetR_N
pfam k141_135154 k141_135154_22 29710 30774 + ADH_zinc_N | ADH_N | ADH_zinc_N_2
TC k141_135154 k141_135154_23 30855 31778 - 3.A.1.1.32
TC k141_135154 k141_135154_24 31775 32782 - 3.A.1.1.32
TC k141_135154 k141_135154_25 32917 34161 - 3.A.1.1.8
Gene ID: k141_135154_14
Type: TC
Location: 13428 - 14315 (-)
Gene ID: k141_135154_15
Type: TC
Location: 14308 - 15111 (-)
Gene ID: k141_135154_16
Type: pfam
Location: 15112 - 16272 (-)
Gene ID: k141_135154_17
Type: CAZyme
Location: 16658 - 18907 (-)
Gene ID: k141_135154_18
Type: CAZyme
Location: 19307 - 23326 (-)
Gene ID: k141_135154_19
Type: TC
Location: 23707 - 25275 (+)
Gene ID: k141_135154_20
Type: TC
Location: 25348 - 28749 (-)
Gene ID: k141_135154_21
Type: STP
Location: 28753 - 29406 (-)
Gene ID: k141_135154_22
Type: pfam
Location: 29710 - 30774 (+)
Gene ID: k141_135154_23
Type: TC
Location: 30855 - 31778 (-)
Gene ID: k141_135154_24
Type: TC
Location: 31775 - 32782 (-)
Gene ID: k141_135154_25
Type: TC
Location: 32917 - 34161 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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