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Cluster: CGMR079623_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_347475 k141_347475_5 2201 4297 + 3.A.3.5.10
TC k141_347475 k141_347475_6 4318 6525 - 2.A.6.5.1
TF k141_347475 k141_347475_7 6685 7311 + MarR
pfam k141_347475 k141_347475_8 7326 8792 + 3Beta_HSD | Epimerase | NmrA | DUF2867 | NAD_binding_10 | GDP_Man_Dehyd
TC k141_347475 k141_347475_9 8862 10712 + 4.C.1.1.14
TC k141_347475 k141_347475_10 10730 11626 + 9.B.115.1.2
pfam k141_347475 k141_347475_11 11634 12263 - His_Phos_1
TC k141_347475 k141_347475_12 12500 13252 + 9.B.124.1.6
STP k141_347475 k141_347475_13 13329 14060 - EAL
TC k141_347475 k141_347475_14 14175 15242 + 9.B.34.1.3
CAZyme k141_347475 k141_347475_15 15255 16652 - GT2
Gene ID: k141_347475_5
Type: TC
Location: 2201 - 4297 (+)
Gene ID: k141_347475_6
Type: TC
Location: 4318 - 6525 (-)
Gene ID: k141_347475_7
Type: TF
Location: 6685 - 7311 (+)
Gene ID: k141_347475_8
Type: pfam
Location: 7326 - 8792 (+)
Gene ID: k141_347475_9
Type: TC
Location: 8862 - 10712 (+)
Gene ID: k141_347475_10
Type: TC
Location: 10730 - 11626 (+)
Gene ID: k141_347475_11
Type: pfam
Location: 11634 - 12263 (-)
Gene ID: k141_347475_12
Type: TC
Location: 12500 - 13252 (+)
Gene ID: k141_347475_13
Type: STP
Location: 13329 - 14060 (-)
Gene ID: k141_347475_14
Type: TC
Location: 14175 - 15242 (+)
Gene ID: k141_347475_15
Type: CAZyme
Location: 15255 - 16652 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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