Cluster: CGMR079544_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR079544
- CGC Family ID: CGCFAM_00286
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_352298 | k141_352298_1 | 266 | 871 | - | GH77 |
| TC | k141_352298 | k141_352298_2 | 1912 | 3111 | - | 3.A.1.1.22 |
| TC | k141_352298 | k141_352298_3 | 3167 | 4006 | - | 3.A.1.1.45 |
| TC | k141_352298 | k141_352298_4 | 4006 | 4860 | - | 3.A.1.1.45 |
| TC | k141_352298 | k141_352298_5 | 4949 | 6268 | - | 3.A.1.1.45 |
| TF | k141_352298 | k141_352298_6 | 6615 | 7334 | + | GntR |
| TC | k141_352298 | k141_352298_7 | 7593 | 8786 | - | 4.A.1.1.10 |
| TC | k141_352298 | k141_352298_8 | 8847 | 9170 | - | 4.A.1.1.8 |
Gene ID: k141_352298_1
Type: CAZyme
Location: 266 - 871 (-)
Type: CAZyme
Location: 266 - 871 (-)
Gene ID: k141_352298_2
Type: TC
Location: 1912 - 3111 (-)
Type: TC
Location: 1912 - 3111 (-)
Gene ID: k141_352298_3
Type: TC
Location: 3167 - 4006 (-)
Type: TC
Location: 3167 - 4006 (-)
Gene ID: k141_352298_4
Type: TC
Location: 4006 - 4860 (-)
Type: TC
Location: 4006 - 4860 (-)
Gene ID: k141_352298_5
Type: TC
Location: 4949 - 6268 (-)
Type: TC
Location: 4949 - 6268 (-)
Gene ID: k141_352298_6
Type: TF
Location: 6615 - 7334 (+)
Type: TF
Location: 6615 - 7334 (+)
Gene ID: k141_352298_7
Type: TC
Location: 7593 - 8786 (-)
Type: TC
Location: 7593 - 8786 (-)
Gene ID: k141_352298_8
Type: TC
Location: 8847 - 9170 (-)
Type: TC
Location: 8847 - 9170 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella_I
Species
Olsenella_I phocaeensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.