Cluster: CGMR079544_CGC1
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR079544
- CGC Family ID: CGCFAM_09025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_279201 | k141_279201_8 | 7663 | 10092 | + | GT2 | GT2 |
| pfam | k141_279201 | k141_279201_9 | 10131 | 11024 | + | NTP_transferase | NTP_transf_3 |
| pfam | k141_279201 | k141_279201_10 | 11014 | 12672 | + | Sulfatase |
| CAZyme | k141_279201 | k141_279201_11 | 12781 | 14697 | + | GT2 |
| pfam | k141_279201 | k141_279201_12 | 14799 | 15074 | + | EamA |
| TC | k141_279201 | k141_279201_13 | 15071 | 15427 | + | 2.A.7.33.5 |
| CAZyme | k141_279201 | k141_279201_14 | 15501 | 16466 | + | GT2 |
| pfam | k141_279201 | k141_279201_15 | 16463 | 16828 | - | DUF2304 |
| CAZyme | k141_279201 | k141_279201_16 | 16837 | 17544 | - | GT2 |
| pfam | k141_279201 | k141_279201_17 | 17546 | 18703 | - | ATPgrasp_ST |
| TC | k141_279201 | k141_279201_18 | 18831 | 20291 | + | 2.A.66.2.23 |
| STP | k141_279201 | k141_279201_19 | 20353 | 21468 | + | Aminotran_1_2 |
| CAZyme | k141_279201 | k141_279201_20 | 21469 | 22434 | + | GT2 |
| CAZyme | k141_279201 | k141_279201_21 | 22446 | 23243 | - | GT2 |
Gene ID: k141_279201_8
Type: CAZyme
Location: 7663 - 10092 (+)
Type: CAZyme
Location: 7663 - 10092 (+)
Gene ID: k141_279201_9
Type: pfam
Location: 10131 - 11024 (+)
Type: pfam
Location: 10131 - 11024 (+)
Gene ID: k141_279201_10
Type: pfam
Location: 11014 - 12672 (+)
Type: pfam
Location: 11014 - 12672 (+)
Gene ID: k141_279201_11
Type: CAZyme
Location: 12781 - 14697 (+)
Type: CAZyme
Location: 12781 - 14697 (+)
Gene ID: k141_279201_12
Type: pfam
Location: 14799 - 15074 (+)
Type: pfam
Location: 14799 - 15074 (+)
Gene ID: k141_279201_13
Type: TC
Location: 15071 - 15427 (+)
Type: TC
Location: 15071 - 15427 (+)
Gene ID: k141_279201_14
Type: CAZyme
Location: 15501 - 16466 (+)
Type: CAZyme
Location: 15501 - 16466 (+)
Gene ID: k141_279201_15
Type: pfam
Location: 16463 - 16828 (-)
Type: pfam
Location: 16463 - 16828 (-)
Gene ID: k141_279201_16
Type: CAZyme
Location: 16837 - 17544 (-)
Type: CAZyme
Location: 16837 - 17544 (-)
Gene ID: k141_279201_17
Type: pfam
Location: 17546 - 18703 (-)
Type: pfam
Location: 17546 - 18703 (-)
Gene ID: k141_279201_18
Type: TC
Location: 18831 - 20291 (+)
Type: TC
Location: 18831 - 20291 (+)
Gene ID: k141_279201_19
Type: STP
Location: 20353 - 21468 (+)
Type: STP
Location: 20353 - 21468 (+)
Gene ID: k141_279201_20
Type: CAZyme
Location: 21469 - 22434 (+)
Type: CAZyme
Location: 21469 - 22434 (+)
Gene ID: k141_279201_21
Type: CAZyme
Location: 22446 - 23243 (-)
Type: CAZyme
Location: 22446 - 23243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Olsenella_I
Species
Olsenella_I phocaeensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.