Cluster: CGMR079502_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR079502
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_75614 | k141_75614_8 | 9395 | 10429 | + | GT4 |
| CAZyme | k141_75614 | k141_75614_9 | 10431 | 11753 | + | GT4 |
| pfam | k141_75614 | k141_75614_10 | 12106 | 14049 | + | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| TC | k141_75614 | k141_75614_11 | 14410 | 15459 | - | 9.B.145.1.2 |
| TF | k141_75614 | k141_75614_12 | 16220 | 16921 | + | Trans_reg_C |
| TC | k141_75614 | k141_75614_13 | 16914 | 18266 | + | 2.A.21.9.1 |
Gene ID: k141_75614_8
Type: CAZyme
Location: 9395 - 10429 (+)
Type: CAZyme
Location: 9395 - 10429 (+)
Gene ID: k141_75614_9
Type: CAZyme
Location: 10431 - 11753 (+)
Type: CAZyme
Location: 10431 - 11753 (+)
Gene ID: k141_75614_10
Type: pfam
Location: 12106 - 14049 (+)
Type: pfam
Location: 12106 - 14049 (+)
Gene ID: k141_75614_11
Type: TC
Location: 14410 - 15459 (-)
Type: TC
Location: 14410 - 15459 (-)
Gene ID: k141_75614_12
Type: TF
Location: 16220 - 16921 (+)
Type: TF
Location: 16220 - 16921 (+)
Gene ID: k141_75614_13
Type: TC
Location: 16914 - 18266 (+)
Type: TC
Location: 16914 - 18266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_75614_11 | vegan > omnivore | 1.53430 | 0.00732 |
| k141_75614_11 | vegetarian > omnivore | 2.75914 | 0.00148 |
| k141_75614_11 | vegetarian > vegan | 1.22484 | 0.03476 |