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Cluster: CGMR079079_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_249227 k141_249227_41 51611 54121 + GH2
STP k141_249227 k141_249227_42 54133 54723 + HD
TC k141_249227 k141_249227_43 54981 55889 + 3.A.1.3.3
TC k141_249227 k141_249227_44 55996 56700 + 3.A.1.3.15
TC k141_249227 k141_249227_45 56739 57503 + 3.A.1.3.10
pfam k141_249227 k141_249227_46 57591 58091 + Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10
pfam k141_249227 k141_249227_47 58135 59148 - 2-Hacid_dh | 2-Hacid_dh_C
TC k141_249227 k141_249227_48 59381 61312 + 1.B.52.2.2
Gene ID: k141_249227_41
Type: CAZyme
Location: 51611 - 54121 (+)
Gene ID: k141_249227_42
Type: STP
Location: 54133 - 54723 (+)
Gene ID: k141_249227_43
Type: TC
Location: 54981 - 55889 (+)
Gene ID: k141_249227_44
Type: TC
Location: 55996 - 56700 (+)
Gene ID: k141_249227_45
Type: TC
Location: 56739 - 57503 (+)
Gene ID: k141_249227_46
Type: pfam
Location: 57591 - 58091 (+)
Gene ID: k141_249227_47
Type: pfam
Location: 58135 - 59148 (-)
Gene ID: k141_249227_48
Type: TC
Location: 59381 - 61312 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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