Cluster: CGMR079079_CGC23
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR079079
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_136881 | k141_136881_7 | 5978 | 6718 | + | GT2 |
| STP | k141_136881 | k141_136881_8 | 6754 | 8019 | + | AAA |
| peptidase | k141_136881 | k141_136881_9 | 8269 | 9963 | + | M03.010 |
| TC | k141_136881 | k141_136881_10 | 10141 | 11889 | - | 1.A.11.2.7 |
| pfam | k141_136881 | k141_136881_11 | 12491 | 13969 | - | SpoIVA_ATPase | SpoIVA_middle | SpoIVA_C |
| pfam | k141_136881 | k141_136881_12 | 13989 | 15542 | - | LysM | SipL | SipL |
| TC | k141_136881 | k141_136881_13 | 15851 | 16615 | + | 3.D.1.8.1 |
| TC | k141_136881 | k141_136881_14 | 16866 | 18221 | + | 2.A.66.1.33 |
| pfam | k141_136881 | k141_136881_15 | 18235 | 18669 | + | Tyr_Deacylase |
| TC | k141_136881 | k141_136881_16 | 18684 | 20060 | + | 2.A.66.1.25 |
| NULL(UNKNOWN) | k141_136881 | k141_136881_17 | 20121 | 21149 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_136881 | k141_136881_18 | 21302 | 22861 | + | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| TC | k141_136881 | k141_136881_19 | 23214 | 24635 | + | 1.A.26.1.3 |
| TC | k141_136881 | k141_136881_20 | 24830 | 26527 | + | 4.C.1.1.6 |
| CAZyme | k141_136881 | k141_136881_21 | 26607 | 28082 | - | CBM91 | GH43_12 |
Gene ID: k141_136881_7
Type: CAZyme
Location: 5978 - 6718 (+)
Type: CAZyme
Location: 5978 - 6718 (+)
Gene ID: k141_136881_8
Type: STP
Location: 6754 - 8019 (+)
Type: STP
Location: 6754 - 8019 (+)
Gene ID: k141_136881_9
Type: peptidase
Location: 8269 - 9963 (+)
Type: peptidase
Location: 8269 - 9963 (+)
Gene ID: k141_136881_10
Type: TC
Location: 10141 - 11889 (-)
Type: TC
Location: 10141 - 11889 (-)
Gene ID: k141_136881_11
Type: pfam
Location: 12491 - 13969 (-)
Type: pfam
Location: 12491 - 13969 (-)
Gene ID: k141_136881_12
Type: pfam
Location: 13989 - 15542 (-)
Type: pfam
Location: 13989 - 15542 (-)
Gene ID: k141_136881_13
Type: TC
Location: 15851 - 16615 (+)
Type: TC
Location: 15851 - 16615 (+)
Gene ID: k141_136881_14
Type: TC
Location: 16866 - 18221 (+)
Type: TC
Location: 16866 - 18221 (+)
Gene ID: k141_136881_15
Type: pfam
Location: 18235 - 18669 (+)
Type: pfam
Location: 18235 - 18669 (+)
Gene ID: k141_136881_16
Type: TC
Location: 18684 - 20060 (+)
Type: TC
Location: 18684 - 20060 (+)
Gene ID: k141_136881_17
Type:
Location: 20121 - 21149 (-)
Type:
Location: 20121 - 21149 (-)
Gene ID: k141_136881_18
Type: pfam
Location: 21302 - 22861 (+)
Type: pfam
Location: 21302 - 22861 (+)
Gene ID: k141_136881_19
Type: TC
Location: 23214 - 24635 (+)
Type: TC
Location: 23214 - 24635 (+)
Gene ID: k141_136881_20
Type: TC
Location: 24830 - 26527 (+)
Type: TC
Location: 24830 - 26527 (+)
Gene ID: k141_136881_21
Type: CAZyme
Location: 26607 - 28082 (-)
Type: CAZyme
Location: 26607 - 28082 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
RGIG4694
Species
RGIG4694 sp934464775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.