Cluster: CGMR079079_CGC22
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR079079
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_37567 | k141_37567_3 | 2305 | 3435 | + | 9.B.141.1.1 |
| NULL(UNKNOWN) | k141_37567 | k141_37567_4 | 3565 | 3747 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_37567 | k141_37567_5 | 3901 | 4896 | + | 8.A.5.1.3 |
| TC | k141_37567 | k141_37567_6 | 4946 | 5566 | - | 9.B.18.1.3 |
| TC | k141_37567 | k141_37567_7 | 5620 | 6360 | - | 3.A.1.103.1 |
| pfam | k141_37567 | k141_37567_8 | 6379 | 7623 | - | ABC2_membrane |
| NULL(UNKNOWN) | k141_37567 | k141_37567_9 | 7683 | 9644 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_37567 | k141_37567_10 | 9641 | 10441 | - | GT2 |
| NULL(UNKNOWN) | k141_37567 | k141_37567_11 | 10417 | 11769 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_37567 | k141_37567_12 | 11766 | 12935 | - | GT4 |
| TF | k141_37567 | k141_37567_13 | 13318 | 13989 | + | Trans_reg_C |
| STP | k141_37567 | k141_37567_14 | 13998 | 14987 | + | HATPase_c |
| TC | k141_37567 | k141_37567_15 | 15307 | 16071 | + | 3.A.1.134.4 |
| TC | k141_37567 | k141_37567_16 | 16068 | 18089 | + | 3.A.1.134.4 |
Gene ID: k141_37567_3
Type: TC
Location: 2305 - 3435 (+)
Type: TC
Location: 2305 - 3435 (+)
Gene ID: k141_37567_4
Type:
Location: 3565 - 3747 (-)
Type:
Location: 3565 - 3747 (-)
Gene ID: k141_37567_5
Type: TC
Location: 3901 - 4896 (+)
Type: TC
Location: 3901 - 4896 (+)
Gene ID: k141_37567_6
Type: TC
Location: 4946 - 5566 (-)
Type: TC
Location: 4946 - 5566 (-)
Gene ID: k141_37567_7
Type: TC
Location: 5620 - 6360 (-)
Type: TC
Location: 5620 - 6360 (-)
Gene ID: k141_37567_8
Type: pfam
Location: 6379 - 7623 (-)
Type: pfam
Location: 6379 - 7623 (-)
Gene ID: k141_37567_9
Type:
Location: 7683 - 9644 (-)
Type:
Location: 7683 - 9644 (-)
Gene ID: k141_37567_10
Type: CAZyme
Location: 9641 - 10441 (-)
Type: CAZyme
Location: 9641 - 10441 (-)
Gene ID: k141_37567_11
Type:
Location: 10417 - 11769 (-)
Type:
Location: 10417 - 11769 (-)
Gene ID: k141_37567_12
Type: CAZyme
Location: 11766 - 12935 (-)
Type: CAZyme
Location: 11766 - 12935 (-)
Gene ID: k141_37567_13
Type: TF
Location: 13318 - 13989 (+)
Type: TF
Location: 13318 - 13989 (+)
Gene ID: k141_37567_14
Type: STP
Location: 13998 - 14987 (+)
Type: STP
Location: 13998 - 14987 (+)
Gene ID: k141_37567_15
Type: TC
Location: 15307 - 16071 (+)
Type: TC
Location: 15307 - 16071 (+)
Gene ID: k141_37567_16
Type: TC
Location: 16068 - 18089 (+)
Type: TC
Location: 16068 - 18089 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
RGIG4694
Species
RGIG4694 sp934464775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.