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Cluster: CGMR079079_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_358084 k141_358084_1 323 1675 + 2.A.66.1.32
peptidase k141_358084 k141_358084_2 1776 3947 - C01.UPA
peptidase k141_358084 k141_358084_3 4276 5622 + M14.UPC
TC k141_358084 k141_358084_4 5665 6447 - 2.A.5.5.2
pfam k141_358084 k141_358084_5 6675 8066 - FAD-depend_C
pfam k141_358084 k141_358084_6 8239 8898 - PhoU | PhoU
TC k141_358084 k141_358084_7 8914 9672 - 3.A.1.7.5
TC k141_358084 k141_358084_8 9702 10544 - 3.A.1.7.5
TC k141_358084 k141_358084_9 10558 11484 - 3.A.1.7.5
pfam k141_358084 k141_358084_10 11481 12338 - PBP_like_2 | PBP_like_2
STP k141_358084 k141_358084_11 12768 14432 + EAL | GGDEF
CAZyme k141_358084 k141_358084_12 14685 15890 + CE2
pfam k141_358084 k141_358084_13 16205 17626 + PK | PK_C
pfam k141_358084 k141_358084_14 17821 19083 + DUF1015
CAZyme k141_358084 k141_358084_15 19154 20338 + GH130_1
STP k141_358084 k141_358084_16 20685 23207 - HATPase_c | HisKA | Response_reg | dCache_1
NULL(UNKNOWN) k141_358084 k141_358084_17 23441 24568 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_358084 k141_358084_18 24762 27230 - GH94
pfam k141_358084 k141_358084_19 27459 28577 - PIN7
CAZyme k141_358084 k141_358084_20 29040 30107 - CE17
Gene ID: k141_358084_1
Type: TC
Location: 323 - 1675 (+)
Gene ID: k141_358084_2
Type: peptidase
Location: 1776 - 3947 (-)
Gene ID: k141_358084_3
Type: peptidase
Location: 4276 - 5622 (+)
Gene ID: k141_358084_4
Type: TC
Location: 5665 - 6447 (-)
Gene ID: k141_358084_5
Type: pfam
Location: 6675 - 8066 (-)
Gene ID: k141_358084_6
Type: pfam
Location: 8239 - 8898 (-)
Gene ID: k141_358084_7
Type: TC
Location: 8914 - 9672 (-)
Gene ID: k141_358084_8
Type: TC
Location: 9702 - 10544 (-)
Gene ID: k141_358084_9
Type: TC
Location: 10558 - 11484 (-)
Gene ID: k141_358084_10
Type: pfam
Location: 11481 - 12338 (-)
Gene ID: k141_358084_11
Type: STP
Location: 12768 - 14432 (+)
Gene ID: k141_358084_12
Type: CAZyme
Location: 14685 - 15890 (+)
Gene ID: k141_358084_13
Type: pfam
Location: 16205 - 17626 (+)
Gene ID: k141_358084_14
Type: pfam
Location: 17821 - 19083 (+)
Gene ID: k141_358084_15
Type: CAZyme
Location: 19154 - 20338 (+)
Gene ID: k141_358084_16
Type: STP
Location: 20685 - 23207 (-)
Gene ID: k141_358084_17
Type:
Location: 23441 - 24568 (-)
Gene ID: k141_358084_18
Type: CAZyme
Location: 24762 - 27230 (-)
Gene ID: k141_358084_19
Type: pfam
Location: 27459 - 28577 (-)
Gene ID: k141_358084_20
Type: CAZyme
Location: 29040 - 30107 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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