Cluster: CGMR078958_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078958
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_170409 | k141_170409_11 | 16736 | 17698 | - | 2.A.28.2.4 |
| pfam | k141_170409 | k141_170409_12 | 17857 | 18813 | + | Mem_trans |
| pfam | k141_170409 | k141_170409_13 | 19047 | 20129 | + | Fic | Fic_N | SoFic-like_C |
| TC | k141_170409 | k141_170409_14 | 20266 | 23358 | - | 5.A.3.10.1 |
| TC | k141_170409 | k141_170409_15 | 23375 | 24463 | - | 5.A.3.10.1 |
| TC | k141_170409 | k141_170409_16 | 24479 | 25252 | - | 5.A.3.10.1 |
| CAZyme | k141_170409 | k141_170409_17 | 25535 | 26905 | + | AA4 |
Gene ID: k141_170409_11
Type: TC
Location: 16736 - 17698 (-)
Type: TC
Location: 16736 - 17698 (-)
Gene ID: k141_170409_12
Type: pfam
Location: 17857 - 18813 (+)
Type: pfam
Location: 17857 - 18813 (+)
Gene ID: k141_170409_13
Type: pfam
Location: 19047 - 20129 (+)
Type: pfam
Location: 19047 - 20129 (+)
Gene ID: k141_170409_14
Type: TC
Location: 20266 - 23358 (-)
Type: TC
Location: 20266 - 23358 (-)
Gene ID: k141_170409_15
Type: TC
Location: 23375 - 24463 (-)
Type: TC
Location: 23375 - 24463 (-)
Gene ID: k141_170409_16
Type: TC
Location: 24479 - 25252 (-)
Type: TC
Location: 24479 - 25252 (-)
Gene ID: k141_170409_17
Type: CAZyme
Location: 25535 - 26905 (+)
Type: CAZyme
Location: 25535 - 26905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oligella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.