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Cluster: CGMR078958_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_139419 k141_139419_1 121 1362 + 1.B.1.4.1
TC k141_139419 k141_139419_2 1909 2268 + 3.D.1.2.1
TC k141_139419 k141_139419_3 2291 2776 + 3.D.1.6.3
TC k141_139419 k141_139419_4 2786 3481 + 3.D.1.2.1
TC k141_139419 k141_139419_5 3484 4740 + 3.D.1.6.1
TC k141_139419 k141_139419_6 4784 5269 + 3.D.1.6.1
TC k141_139419 k141_139419_7 5275 6642 + 3.D.1.6.4
TC k141_139419 k141_139419_8 6655 8955 + 3.D.1.6.4
TC k141_139419 k141_139419_9 8955 10055 + 3.D.1.2.1
TC k141_139419 k141_139419_10 10066 10554 + 3.D.1.6.3
TC k141_139419 k141_139419_11 10567 11214 + 3.D.1.2.1
TC k141_139419 k141_139419_12 11211 11537 + 3.D.1.2.1
TC k141_139419 k141_139419_13 11549 13552 + 3.D.1.2.1
TC k141_139419 k141_139419_14 13554 15032 + 3.D.1.2.1
TC k141_139419 k141_139419_15 15042 16526 + 3.D.1.2.1
pfam k141_139419 k141_139419_16 16910 17242 - YjdM | Zn_Ribbon_YjdM
TC k141_139419 k141_139419_17 17409 18032 - 1.A.62.2.3
pfam k141_139419 k141_139419_18 18539 20917 + Fer4_5 | Fer4_5
pfam k141_139419 k141_139419_19 20986 22923 + nos_propeller | nos_propeller_2
TC k141_139419 k141_139419_20 22938 24245 + 3.A.1.132.2
TC k141_139419 k141_139419_21 24232 25134 + 3.A.1.132.2
TC k141_139419 k141_139419_22 25131 25958 + 3.A.1.132.2
pfam k141_139419 k141_139419_23 25980 26540 + NosL
pfam k141_139419 k141_139419_24 26553 27548 + ApbE
CAZyme k141_139419 k141_139419_25 27618 28445 - CE1
Gene ID: k141_139419_1
Type: TC
Location: 121 - 1362 (+)
Gene ID: k141_139419_2
Type: TC
Location: 1909 - 2268 (+)
Gene ID: k141_139419_3
Type: TC
Location: 2291 - 2776 (+)
Gene ID: k141_139419_4
Type: TC
Location: 2786 - 3481 (+)
Gene ID: k141_139419_5
Type: TC
Location: 3484 - 4740 (+)
Gene ID: k141_139419_6
Type: TC
Location: 4784 - 5269 (+)
Gene ID: k141_139419_7
Type: TC
Location: 5275 - 6642 (+)
Gene ID: k141_139419_8
Type: TC
Location: 6655 - 8955 (+)
Gene ID: k141_139419_9
Type: TC
Location: 8955 - 10055 (+)
Gene ID: k141_139419_10
Type: TC
Location: 10066 - 10554 (+)
Gene ID: k141_139419_11
Type: TC
Location: 10567 - 11214 (+)
Gene ID: k141_139419_12
Type: TC
Location: 11211 - 11537 (+)
Gene ID: k141_139419_13
Type: TC
Location: 11549 - 13552 (+)
Gene ID: k141_139419_14
Type: TC
Location: 13554 - 15032 (+)
Gene ID: k141_139419_15
Type: TC
Location: 15042 - 16526 (+)
Gene ID: k141_139419_16
Type: pfam
Location: 16910 - 17242 (-)
Gene ID: k141_139419_17
Type: TC
Location: 17409 - 18032 (-)
Gene ID: k141_139419_18
Type: pfam
Location: 18539 - 20917 (+)
Gene ID: k141_139419_19
Type: pfam
Location: 20986 - 22923 (+)
Gene ID: k141_139419_20
Type: TC
Location: 22938 - 24245 (+)
Gene ID: k141_139419_21
Type: TC
Location: 24232 - 25134 (+)
Gene ID: k141_139419_22
Type: TC
Location: 25131 - 25958 (+)
Gene ID: k141_139419_23
Type: pfam
Location: 25980 - 26540 (+)
Gene ID: k141_139419_24
Type: pfam
Location: 26553 - 27548 (+)
Gene ID: k141_139419_25
Type: CAZyme
Location: 27618 - 28445 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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