Cluster: CGMR078958_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078958
- CGC Family ID: CGCFAM_09022
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_253908 | k141_253908_30 | 31412 | 32380 | + | CE1 |
| NULL(UNKNOWN) | k141_253908 | k141_253908_31 | 32419 | 32811 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | k141_253908 | k141_253908_32 | 32880 | 33749 | - | Pkinase |
| CAZyme | k141_253908 | k141_253908_33 | 33950 | 34999 | + | CE1 |
| pfam | k141_253908 | k141_253908_34 | 34996 | 35676 | - | DNA_alkylation |
| TC | k141_253908 | k141_253908_35 | 35688 | 36119 | - | 9.B.27.3.3 |
| TC | k141_253908 | k141_253908_36 | 36196 | 36576 | + | 1.A.43.1.1 |
Gene ID: k141_253908_30
Type: CAZyme
Location: 31412 - 32380 (+)
Type: CAZyme
Location: 31412 - 32380 (+)
Gene ID: k141_253908_31
Type:
Location: 32419 - 32811 (-)
Type:
Location: 32419 - 32811 (-)
Gene ID: k141_253908_32
Type: STP
Location: 32880 - 33749 (-)
Type: STP
Location: 32880 - 33749 (-)
Gene ID: k141_253908_33
Type: CAZyme
Location: 33950 - 34999 (+)
Type: CAZyme
Location: 33950 - 34999 (+)
Gene ID: k141_253908_34
Type: pfam
Location: 34996 - 35676 (-)
Type: pfam
Location: 34996 - 35676 (-)
Gene ID: k141_253908_35
Type: TC
Location: 35688 - 36119 (-)
Type: TC
Location: 35688 - 36119 (-)
Gene ID: k141_253908_36
Type: TC
Location: 36196 - 36576 (+)
Type: TC
Location: 36196 - 36576 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Oligella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.