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Cluster: CGMR078958_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_253908 k141_253908_12 11813 12523 - CBM50
pfam k141_253908 k141_253908_13 12645 13505 - PCMT
pfam k141_253908 k141_253908_14 13527 14279 - SurE
TC k141_253908 k141_253908_15 14454 15140 + 9.B.31.1.1
pfam k141_253908 k141_253908_16 15148 16176 - TsaD | HypF_C_2
TC k141_253908 k141_253908_17 16276 17565 + 2.A.40.7.6
pfam k141_253908 k141_253908_18 17697 18083 + Thioredoxin | Thioredoxin_2 | Thioredoxin_9
pfam k141_253908 k141_253908_19 18184 18783 - UPF0029 | DUF1949
TC k141_253908 k141_253908_20 18809 20410 - 3.A.1.121.4
peptidase k141_253908 k141_253908_21 20443 21477 - S66.UPW
pfam k141_253908 k141_253908_22 21526 21996 - dCMP_cyt_deam_1 | MafB19-deam
CAZyme k141_253908 k141_253908_23 22111 23241 + CE1
TC k141_253908 k141_253908_24 23319 24656 - 2.A.56.3.3
pfam k141_253908 k141_253908_25 24649 25197 - DctQ
TC k141_253908 k141_253908_26 25278 26276 - 2.A.56.3.3
Gene ID: k141_253908_12
Type: CAZyme
Location: 11813 - 12523 (-)
Gene ID: k141_253908_13
Type: pfam
Location: 12645 - 13505 (-)
Gene ID: k141_253908_14
Type: pfam
Location: 13527 - 14279 (-)
Gene ID: k141_253908_15
Type: TC
Location: 14454 - 15140 (+)
Gene ID: k141_253908_16
Type: pfam
Location: 15148 - 16176 (-)
Gene ID: k141_253908_17
Type: TC
Location: 16276 - 17565 (+)
Gene ID: k141_253908_18
Type: pfam
Location: 17697 - 18083 (+)
Gene ID: k141_253908_19
Type: pfam
Location: 18184 - 18783 (-)
Gene ID: k141_253908_20
Type: TC
Location: 18809 - 20410 (-)
Gene ID: k141_253908_21
Type: peptidase
Location: 20443 - 21477 (-)
Gene ID: k141_253908_22
Type: pfam
Location: 21526 - 21996 (-)
Gene ID: k141_253908_23
Type: CAZyme
Location: 22111 - 23241 (+)
Gene ID: k141_253908_24
Type: TC
Location: 23319 - 24656 (-)
Gene ID: k141_253908_25
Type: pfam
Location: 24649 - 25197 (-)
Gene ID: k141_253908_26
Type: TC
Location: 25278 - 26276 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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