Cluster: CGMR078872_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078872
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_17789 | k141_17789_24 | 25195 | 26502 | + | 2.A.1.52.1 |
| pfam | k141_17789 | k141_17789_25 | 26519 | 27562 | + | AP_endonuc_2 |
| TC | k141_17789 | k141_17789_26 | 27587 | 28936 | + | 2.A.25.1.3 |
| pfam | k141_17789 | k141_17789_27 | 28993 | 29265 | - | Acylphosphatase |
| peptidase | k141_17789 | k141_17789_28 | 29275 | 29853 | - | M95.UPW |
| TC | k141_17789 | k141_17789_29 | 29858 | 33205 | - | 2.A.56.1.1 |
| pfam | k141_17789 | k141_17789_30 | 33202 | 33693 | - | DctQ |
| CAZyme | k141_17789 | k141_17789_31 | 34066 | 35085 | - | GT2 |
Gene ID: k141_17789_24
Type: TC
Location: 25195 - 26502 (+)
Type: TC
Location: 25195 - 26502 (+)
Gene ID: k141_17789_25
Type: pfam
Location: 26519 - 27562 (+)
Type: pfam
Location: 26519 - 27562 (+)
Gene ID: k141_17789_26
Type: TC
Location: 27587 - 28936 (+)
Type: TC
Location: 27587 - 28936 (+)
Gene ID: k141_17789_27
Type: pfam
Location: 28993 - 29265 (-)
Type: pfam
Location: 28993 - 29265 (-)
Gene ID: k141_17789_28
Type: peptidase
Location: 29275 - 29853 (-)
Type: peptidase
Location: 29275 - 29853 (-)
Gene ID: k141_17789_29
Type: TC
Location: 29858 - 33205 (-)
Type: TC
Location: 29858 - 33205 (-)
Gene ID: k141_17789_30
Type: pfam
Location: 33202 - 33693 (-)
Type: pfam
Location: 33202 - 33693 (-)
Gene ID: k141_17789_31
Type: CAZyme
Location: 34066 - 35085 (-)
Type: CAZyme
Location: 34066 - 35085 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003480315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.