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Cluster: CGMR078872_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_110742 k141_110742_18 14226 14948 - 3.A.1.3.15
TC k141_110742 k141_110742_19 14932 15600 - 3.A.1.3.15
TC k141_110742 k141_110742_20 15623 16504 - 3.A.1.3.15
CAZyme k141_110742 k141_110742_21 16765 17634 + CE4
CAZyme k141_110742 k141_110742_22 17631 18467 + CE4
pfam k141_110742 k141_110742_23 18460 19854 + MatE | MatE
STP k141_110742 k141_110742_24 19910 20494 + TetR_N
TC k141_110742 k141_110742_25 20874 22409 + 2.A.21.2.3
Gene ID: k141_110742_18
Type: TC
Location: 14226 - 14948 (-)
Gene ID: k141_110742_19
Type: TC
Location: 14932 - 15600 (-)
Gene ID: k141_110742_20
Type: TC
Location: 15623 - 16504 (-)
Gene ID: k141_110742_21
Type: CAZyme
Location: 16765 - 17634 (+)
Gene ID: k141_110742_22
Type: CAZyme
Location: 17631 - 18467 (+)
Gene ID: k141_110742_23
Type: pfam
Location: 18460 - 19854 (+)
Gene ID: k141_110742_24
Type: STP
Location: 19910 - 20494 (+)
Gene ID: k141_110742_25
Type: TC
Location: 20874 - 22409 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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