Cluster: CGMR078872_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078872
- CGC Family ID: CGCFAM_00149
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1222 | k141_1222_27 | 28695 | 30194 | - | 2.A.25.1.2 |
| pfam | k141_1222 | k141_1222_28 | 30226 | 31134 | - | DHDPS |
| TF | k141_1222 | k141_1222_29 | 31354 | 32253 | + | HTH_1 |
| CAZyme | k141_1222 | k141_1222_30 | 32358 | 33440 | + | GT28 |
| pfam | k141_1222 | k141_1222_31 | 33542 | 33958 | - | HIT | DcpS_C |
| TC | k141_1222 | k141_1222_32 | 34036 | 34683 | - | 9.B.104.1.3 |
| TF | k141_1222 | k141_1222_33 | 34709 | 35701 | - | HTH_1 |
| TC | k141_1222 | k141_1222_34 | 35821 | 37326 | - | 2.A.80.1.2 |
Gene ID: k141_1222_27
Type: TC
Location: 28695 - 30194 (-)
Type: TC
Location: 28695 - 30194 (-)
Gene ID: k141_1222_28
Type: pfam
Location: 30226 - 31134 (-)
Type: pfam
Location: 30226 - 31134 (-)
Gene ID: k141_1222_29
Type: TF
Location: 31354 - 32253 (+)
Type: TF
Location: 31354 - 32253 (+)
Gene ID: k141_1222_30
Type: CAZyme
Location: 32358 - 33440 (+)
Type: CAZyme
Location: 32358 - 33440 (+)
Gene ID: k141_1222_31
Type: pfam
Location: 33542 - 33958 (-)
Type: pfam
Location: 33542 - 33958 (-)
Gene ID: k141_1222_32
Type: TC
Location: 34036 - 34683 (-)
Type: TC
Location: 34036 - 34683 (-)
Gene ID: k141_1222_33
Type: TF
Location: 34709 - 35701 (-)
Type: TF
Location: 34709 - 35701 (-)
Gene ID: k141_1222_34
Type: TC
Location: 35821 - 37326 (-)
Type: TC
Location: 35821 - 37326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp003480315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.