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Cluster: CGMR078709_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_248595 k141_248595_28 30932 31438 + GH23
NULL(UNKNOWN) k141_248595 k141_248595_29 31943 32305 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_248595 k141_248595_30 32337 32636 + TraL
TC k141_248595 k141_248595_31 32651 33217 + 3.A.7.11.1
pfam k141_248595 k141_248595_32 33204 34208 + TraK_N | TraK_C
TC k141_248595 k141_248595_33 34205 35629 + 3.A.7.11.1
TC k141_248595 k141_248595_34 35613 36443 + 3.A.7.11.1
pfam k141_248595 k141_248595_35 36440 37081 + TraV
TC k141_248595 k141_248595_36 37089 39671 + 3.A.7.11.1
NULL(UNKNOWN) k141_248595 k141_248595_37 39668 40024 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_248595 k141_248595_38 40021 40623 + 3.A.7.16.1
NULL(UNKNOWN) k141_248595 k141_248595_39 40635 41018 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_248595 k141_248595_40 41015 41644 + 3.A.7.16.1
TC k141_248595 k141_248595_41 41641 42666 + 3.A.7.11.1
Gene ID: k141_248595_28
Type: CAZyme
Location: 30932 - 31438 (+)
Gene ID: k141_248595_29
Type:
Location: 31943 - 32305 (+)
Gene ID: k141_248595_30
Type: pfam
Location: 32337 - 32636 (+)
Gene ID: k141_248595_31
Type: TC
Location: 32651 - 33217 (+)
Gene ID: k141_248595_32
Type: pfam
Location: 33204 - 34208 (+)
Gene ID: k141_248595_33
Type: TC
Location: 34205 - 35629 (+)
Gene ID: k141_248595_34
Type: TC
Location: 35613 - 36443 (+)
Gene ID: k141_248595_35
Type: pfam
Location: 36440 - 37081 (+)
Gene ID: k141_248595_36
Type: TC
Location: 37089 - 39671 (+)
Gene ID: k141_248595_37
Type:
Location: 39668 - 40024 (+)
Gene ID: k141_248595_38
Type: TC
Location: 40021 - 40623 (+)
Gene ID: k141_248595_39
Type:
Location: 40635 - 41018 (+)
Gene ID: k141_248595_40
Type: TC
Location: 41015 - 41644 (+)
Gene ID: k141_248595_41
Type: TC
Location: 41641 - 42666 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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