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Cluster: CGMR078709_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_55787 k141_55787_6 2898 3596 - 9.B.169.2.2
TC k141_55787 k141_55787_7 3661 4776 - 9.B.34.1.2
pfam k141_55787 k141_55787_8 5126 5392 - eIF-1a
STP k141_55787 k141_55787_9 5637 6791 - CBS | CBS
TC k141_55787 k141_55787_10 6935 7786 + 2.A.25.1.6
NULL(UNKNOWN) k141_55787 k141_55787_11 7797 8057 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_55787 k141_55787_12 8100 9305 - GSDH
CAZyme k141_55787 k141_55787_13 9355 10308 + GH23
pfam k141_55787 k141_55787_14 10560 10832 + Iron_traffic
TC k141_55787 k141_55787_15 10926 11591 + 1.A.62.2.3
Gene ID: k141_55787_6
Type: TC
Location: 2898 - 3596 (-)
Gene ID: k141_55787_7
Type: TC
Location: 3661 - 4776 (-)
Gene ID: k141_55787_8
Type: pfam
Location: 5126 - 5392 (-)
Gene ID: k141_55787_9
Type: STP
Location: 5637 - 6791 (-)
Gene ID: k141_55787_10
Type: TC
Location: 6935 - 7786 (+)
Gene ID: k141_55787_11
Type:
Location: 7797 - 8057 (-)
Gene ID: k141_55787_12
Type: pfam
Location: 8100 - 9305 (-)
Gene ID: k141_55787_13
Type: CAZyme
Location: 9355 - 10308 (+)
Gene ID: k141_55787_14
Type: pfam
Location: 10560 - 10832 (+)
Gene ID: k141_55787_15
Type: TC
Location: 10926 - 11591 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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