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Cluster: CGMR078709_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_263757 k141_263757_3 1297 3117 + 3.A.1.210.9
pfam k141_263757 k141_263757_4 3308 4219 + 2-Hacid_dh | 2-Hacid_dh_C
pfam k141_263757 k141_263757_5 4313 4651 + MazG-like
TC k141_263757 k141_263757_6 4803 5840 - 2.A.56.1.2
pfam k141_263757 k141_263757_7 6000 6938 - LPG_synthase_TM
CAZyme k141_263757 k141_263757_8 6935 7948 - GT2
CAZyme k141_263757 k141_263757_9 8099 9646 + GT83
pfam k141_263757 k141_263757_10 9643 10653 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
pfam k141_263757 k141_263757_11 10650 12005 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC k141_263757 k141_263757_12 11999 13297 - 2.A.56.1.4
pfam k141_263757 k141_263757_13 13294 13842 - DctQ
TF k141_263757 k141_263757_14 13964 14902 + HTH_1
TC k141_263757 k141_263757_15 15098 15997 + 3.A.1.3.19
TC k141_263757 k141_263757_16 16112 16864 + 3.A.1.3.19
TC k141_263757 k141_263757_17 16866 17537 + 3.A.1.3.19
TC k141_263757 k141_263757_18 17707 18444 + 3.A.1.3.22
Gene ID: k141_263757_3
Type: TC
Location: 1297 - 3117 (+)
Gene ID: k141_263757_4
Type: pfam
Location: 3308 - 4219 (+)
Gene ID: k141_263757_5
Type: pfam
Location: 4313 - 4651 (+)
Gene ID: k141_263757_6
Type: TC
Location: 4803 - 5840 (-)
Gene ID: k141_263757_7
Type: pfam
Location: 6000 - 6938 (-)
Gene ID: k141_263757_8
Type: CAZyme
Location: 6935 - 7948 (-)
Gene ID: k141_263757_9
Type: CAZyme
Location: 8099 - 9646 (+)
Gene ID: k141_263757_10
Type: pfam
Location: 9643 - 10653 (+)
Gene ID: k141_263757_11
Type: pfam
Location: 10650 - 12005 (+)
Gene ID: k141_263757_12
Type: TC
Location: 11999 - 13297 (-)
Gene ID: k141_263757_13
Type: pfam
Location: 13294 - 13842 (-)
Gene ID: k141_263757_14
Type: TF
Location: 13964 - 14902 (+)
Gene ID: k141_263757_15
Type: TC
Location: 15098 - 15997 (+)
Gene ID: k141_263757_16
Type: TC
Location: 16112 - 16864 (+)
Gene ID: k141_263757_17
Type: TC
Location: 16866 - 17537 (+)
Gene ID: k141_263757_18
Type: TC
Location: 17707 - 18444 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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