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Cluster: CGMR078709_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_254170 k141_254170_5 5886 7334 + 2.A.66.2.23
CAZyme k141_254170 k141_254170_6 7369 8319 + GT2
pfam k141_254170 k141_254170_7 8320 9357 - Acetyltransf_6
NULL(UNKNOWN) k141_254170 k141_254170_8 9367 10371 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_254170 k141_254170_9 10377 11339 - CE4
pfam k141_254170 k141_254170_10 11336 12637 - Wzy_C | DUF5935
pfam k141_254170 k141_254170_11 12850 14460 - PMT_2
CAZyme k141_254170 k141_254170_12 14447 15628 - GT4
Gene ID: k141_254170_5
Type: TC
Location: 5886 - 7334 (+)
Gene ID: k141_254170_6
Type: CAZyme
Location: 7369 - 8319 (+)
Gene ID: k141_254170_7
Type: pfam
Location: 8320 - 9357 (-)
Gene ID: k141_254170_8
Type:
Location: 9367 - 10371 (-)
Gene ID: k141_254170_9
Type: CAZyme
Location: 10377 - 11339 (-)
Gene ID: k141_254170_10
Type: pfam
Location: 11336 - 12637 (-)
Gene ID: k141_254170_11
Type: pfam
Location: 12850 - 14460 (-)
Gene ID: k141_254170_12
Type: CAZyme
Location: 14447 - 15628 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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