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Cluster: CGMR078709_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80168 k141_80168_4 2478 3971 - 3.A.9.1.1
pfam k141_80168 k141_80168_5 3982 4281 - GatC | Gta3
TC k141_80168 k141_80168_6 4499 5542 + 9.B.157.1.3
TC k141_80168 k141_80168_7 5572 6489 + 9.B.157.1.2
pfam k141_80168 k141_80168_8 6486 7007 + MreD
peptidase k141_80168 k141_80168_9 7027 8970 + X52.001
TC k141_80168 k141_80168_10 8971 9861 - 2.A.7.3.52
TC k141_80168 k141_80168_11 9966 10703 - 3.A.1.3.26
TC k141_80168 k141_80168_12 10700 11482 - 3.A.1.3.17
TC k141_80168 k141_80168_13 11522 12283 - 3.A.1.3.27
pfam k141_80168 k141_80168_14 12480 13391 - Arginase
TC k141_80168 k141_80168_15 13406 14164 - 2.A.102.3.2
CAZyme k141_80168 k141_80168_16 14420 16114 - AA3_2
TC k141_80168 k141_80168_17 16359 17477 + 3.A.1.27.1
TC k141_80168 k141_80168_18 17480 18283 + 3.A.1.27.1
Gene ID: k141_80168_4
Type: TC
Location: 2478 - 3971 (-)
Gene ID: k141_80168_5
Type: pfam
Location: 3982 - 4281 (-)
Gene ID: k141_80168_6
Type: TC
Location: 4499 - 5542 (+)
Gene ID: k141_80168_7
Type: TC
Location: 5572 - 6489 (+)
Gene ID: k141_80168_8
Type: pfam
Location: 6486 - 7007 (+)
Gene ID: k141_80168_9
Type: peptidase
Location: 7027 - 8970 (+)
Gene ID: k141_80168_10
Type: TC
Location: 8971 - 9861 (-)
Gene ID: k141_80168_11
Type: TC
Location: 9966 - 10703 (-)
Gene ID: k141_80168_12
Type: TC
Location: 10700 - 11482 (-)
Gene ID: k141_80168_13
Type: TC
Location: 11522 - 12283 (-)
Gene ID: k141_80168_14
Type: pfam
Location: 12480 - 13391 (-)
Gene ID: k141_80168_15
Type: TC
Location: 13406 - 14164 (-)
Gene ID: k141_80168_16
Type: CAZyme
Location: 14420 - 16114 (-)
Gene ID: k141_80168_17
Type: TC
Location: 16359 - 17477 (+)
Gene ID: k141_80168_18
Type: TC
Location: 17480 - 18283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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