Cluster: CGMR078709_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078709
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_210808 | k141_210808_6 | 5664 | 6389 | - | 2.A.122.1.7 |
| TC | k141_210808 | k141_210808_7 | 6382 | 6756 | - | 1.E.14.1.7 |
| TF | k141_210808 | k141_210808_8 | 6818 | 7828 | - | HTH_8 | HTH_AraC |
| pfam | k141_210808 | k141_210808_9 | 7946 | 9556 | + | FAD_binding_2 | DAO | FAD_oxidored |
| CAZyme | k141_210808 | k141_210808_10 | 9612 | 11246 | + | AA3_2 |
Gene ID: k141_210808_6
Type: TC
Location: 5664 - 6389 (-)
Type: TC
Location: 5664 - 6389 (-)
Gene ID: k141_210808_7
Type: TC
Location: 6382 - 6756 (-)
Type: TC
Location: 6382 - 6756 (-)
Gene ID: k141_210808_8
Type: TF
Location: 6818 - 7828 (-)
Type: TF
Location: 6818 - 7828 (-)
Gene ID: k141_210808_9
Type: pfam
Location: 7946 - 9556 (+)
Type: pfam
Location: 7946 - 9556 (+)
Gene ID: k141_210808_10
Type: CAZyme
Location: 9612 - 11246 (+)
Type: CAZyme
Location: 9612 - 11246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Alicycliphilus
Species
Alicycliphilus sp018054745
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.