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Cluster: CGMR078667_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_200498 k141_200498_77 94862 95974 - GT2
pfam k141_200498 k141_200498_78 95985 98330 - Lactamase_B | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3 | Choline_bind_3
CAZyme k141_200498 k141_200498_79 98587 101721 + GH73
TF k141_200498 k141_200498_80 101938 103713 + MarR
TC k141_200498 k141_200498_81 103761 104753 + 2.A.7.18.1
pfam k141_200498 k141_200498_82 104765 105130 - Hpt
TC k141_200498 k141_200498_83 105324 105941 - 9.B.18.1.2
STP k141_200498 k141_200498_84 105941 107221 - Aminotran_1_2
CAZyme k141_200498 k141_200498_85 107218 108645 - GT4
Gene ID: k141_200498_77
Type: CAZyme
Location: 94862 - 95974 (-)
Gene ID: k141_200498_78
Type: pfam
Location: 95985 - 98330 (-)
Gene ID: k141_200498_79
Type: CAZyme
Location: 98587 - 101721 (+)
Gene ID: k141_200498_80
Type: TF
Location: 101938 - 103713 (+)
Gene ID: k141_200498_81
Type: TC
Location: 103761 - 104753 (+)
Gene ID: k141_200498_82
Type: pfam
Location: 104765 - 105130 (-)
Gene ID: k141_200498_83
Type: TC
Location: 105324 - 105941 (-)
Gene ID: k141_200498_84
Type: STP
Location: 105941 - 107221 (-)
Gene ID: k141_200498_85
Type: CAZyme
Location: 107218 - 108645 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
Eggerthellaceae
→
Genus
Xiamenia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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