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Cluster: CGMR078421_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_107125 k141_107125_1 1018 2031 - CE4
TF k141_107125 k141_107125_2 2440 3462 + LacI
pfam k141_107125 k141_107125_3 3562 4884 + SBP_bac_8
TC k141_107125 k141_107125_4 5007 5906 + 3.A.1.1.47
TC k141_107125 k141_107125_5 5925 6758 + 3.A.1.1.47
CAZyme k141_107125 k141_107125_6 6780 9125 + GH65
pfam k141_107125 k141_107125_7 9129 9761 + Hydrolase | HAD_2
TF k141_107125 k141_107125_8 10054 11187 + HTH_AraC | HTH_AraC
TC k141_107125 k141_107125_9 11184 12908 + 8.A.59.2.1
NULL(UNKNOWN) k141_107125 k141_107125_10 13242 14969 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_107125 k141_107125_11 15060 15986 + 3.A.1.1.29
TC k141_107125 k141_107125_12 15997 16914 + 3.A.1.1.29
CAZyme k141_107125 k141_107125_13 16958 18331 + GH29
Gene ID: k141_107125_1
Type: CAZyme
Location: 1018 - 2031 (-)
Gene ID: k141_107125_2
Type: TF
Location: 2440 - 3462 (+)
Gene ID: k141_107125_3
Type: pfam
Location: 3562 - 4884 (+)
Gene ID: k141_107125_4
Type: TC
Location: 5007 - 5906 (+)
Gene ID: k141_107125_5
Type: TC
Location: 5925 - 6758 (+)
Gene ID: k141_107125_6
Type: CAZyme
Location: 6780 - 9125 (+)
Gene ID: k141_107125_7
Type: pfam
Location: 9129 - 9761 (+)
Gene ID: k141_107125_8
Type: TF
Location: 10054 - 11187 (+)
Gene ID: k141_107125_9
Type: TC
Location: 11184 - 12908 (+)
Gene ID: k141_107125_10
Type:
Location: 13242 - 14969 (+)
Gene ID: k141_107125_11
Type: TC
Location: 15060 - 15986 (+)
Gene ID: k141_107125_12
Type: TC
Location: 15997 - 16914 (+)
Gene ID: k141_107125_13
Type: CAZyme
Location: 16958 - 18331 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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