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Cluster: CGMR078421_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53863 k141_53863_9 15633 16571 + 3.A.1.1.10
TC k141_53863 k141_53863_10 16585 17511 + 3.A.1.1.29
CAZyme k141_53863 k141_53863_11 17666 19339 + GH110
CAZyme k141_53863 k141_53863_12 19429 20631 + GH109
CAZyme k141_53863 k141_53863_13 20645 23599 + GH2
CAZyme k141_53863 k141_53863_14 24042 25103 - GH179
TF k141_53863 k141_53863_15 25117 26325 - MarR
CAZyme k141_53863 k141_53863_16 27026 28057 + GH177
TC k141_53863 k141_53863_17 28125 29366 + 3.A.1.1.44
TC k141_53863 k141_53863_18 29571 30455 + 3.A.1.1.28
TC k141_53863 k141_53863_19 30455 31294 + 3.A.1.1.42
Gene ID: k141_53863_9
Type: TC
Location: 15633 - 16571 (+)
Gene ID: k141_53863_10
Type: TC
Location: 16585 - 17511 (+)
Gene ID: k141_53863_11
Type: CAZyme
Location: 17666 - 19339 (+)
Gene ID: k141_53863_12
Type: CAZyme
Location: 19429 - 20631 (+)
Gene ID: k141_53863_13
Type: CAZyme
Location: 20645 - 23599 (+)
Gene ID: k141_53863_14
Type: CAZyme
Location: 24042 - 25103 (-)
Gene ID: k141_53863_15
Type: TF
Location: 25117 - 26325 (-)
Gene ID: k141_53863_16
Type: CAZyme
Location: 27026 - 28057 (+)
Gene ID: k141_53863_17
Type: TC
Location: 28125 - 29366 (+)
Gene ID: k141_53863_18
Type: TC
Location: 29571 - 30455 (+)
Gene ID: k141_53863_19
Type: TC
Location: 30455 - 31294 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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