Cluster: CGMR078421_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_00141
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_44250 | k141_44250_2 | 621 | 3272 | - | CBM67 | GH78 |
| TC | k141_44250 | k141_44250_3 | 3312 | 4220 | - | 3.A.1.1.10 |
| TC | k141_44250 | k141_44250_4 | 4238 | 5164 | - | 3.A.1.1.10 |
| TC | k141_44250 | k141_44250_5 | 5274 | 6791 | - | 3.A.1.1.10 |
| TF | k141_44250 | k141_44250_6 | 7144 | 9489 | + | HTH_AraC |
| CAZyme | k141_44250 | k141_44250_7 | 9438 | 12482 | - | GH106 |
Gene ID: k141_44250_2
Type: CAZyme
Location: 621 - 3272 (-)
Type: CAZyme
Location: 621 - 3272 (-)
Gene ID: k141_44250_3
Type: TC
Location: 3312 - 4220 (-)
Type: TC
Location: 3312 - 4220 (-)
Gene ID: k141_44250_4
Type: TC
Location: 4238 - 5164 (-)
Type: TC
Location: 4238 - 5164 (-)
Gene ID: k141_44250_5
Type: TC
Location: 5274 - 6791 (-)
Type: TC
Location: 5274 - 6791 (-)
Gene ID: k141_44250_6
Type: TF
Location: 7144 - 9489 (+)
Type: TF
Location: 7144 - 9489 (+)
Gene ID: k141_44250_7
Type: CAZyme
Location: 9438 - 12482 (-)
Type: CAZyme
Location: 9438 - 12482 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.