Cluster: CGMR078421_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_05776
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_45239 | k141_45239_26 | 23450 | 25654 | - | 3.A.7.7.1 |
| pfam | k141_45239 | k141_45239_27 | 25691 | 26089 | - | Trns_repr_metal |
| TF | k141_45239 | k141_45239_28 | 26388 | 26756 | + | Fe_dep_repress |
| CAZyme | k141_45239 | k141_45239_29 | 26806 | 28692 | - | GH129 |
Gene ID: k141_45239_26
Type: TC
Location: 23450 - 25654 (-)
Type: TC
Location: 23450 - 25654 (-)
Gene ID: k141_45239_27
Type: pfam
Location: 25691 - 26089 (-)
Type: pfam
Location: 25691 - 26089 (-)
Gene ID: k141_45239_28
Type: TF
Location: 26388 - 26756 (+)
Type: TF
Location: 26388 - 26756 (+)
Gene ID: k141_45239_29
Type: CAZyme
Location: 26806 - 28692 (-)
Type: CAZyme
Location: 26806 - 28692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.