Cluster: CGMR078421_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: fructan
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_00035
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5435 | k141_5435_2 | 1699 | 2631 | + | 3.A.1.1.10 |
| TC | k141_5435 | k141_5435_3 | 2643 | 3536 | + | 3.A.1.1.29 |
| TC | k141_5435 | k141_5435_4 | 3585 | 5168 | + | 3.A.1.1.29 |
| CAZyme | k141_5435 | k141_5435_5 | 5203 | 6630 | + | GH32 |
| CAZyme | k141_5435 | k141_5435_6 | 6687 | 7781 | + | GH172 |
| CAZyme | k141_5435 | k141_5435_7 | 7857 | 9464 | + | GH32 |
Gene ID: k141_5435_2
Type: TC
Location: 1699 - 2631 (+)
Type: TC
Location: 1699 - 2631 (+)
Gene ID: k141_5435_3
Type: TC
Location: 2643 - 3536 (+)
Type: TC
Location: 2643 - 3536 (+)
Gene ID: k141_5435_4
Type: TC
Location: 3585 - 5168 (+)
Type: TC
Location: 3585 - 5168 (+)
Gene ID: k141_5435_5
Type: CAZyme
Location: 5203 - 6630 (+)
Type: CAZyme
Location: 5203 - 6630 (+)
Gene ID: k141_5435_6
Type: CAZyme
Location: 6687 - 7781 (+)
Type: CAZyme
Location: 6687 - 7781 (+)
Gene ID: k141_5435_7
Type: CAZyme
Location: 7857 - 9464 (+)
Type: CAZyme
Location: 7857 - 9464 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.