Cluster: CGMR078421_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_01474
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_123227 | k141_123227_40 | 48626 | 49645 | + | GH29 |
| CAZyme | k141_123227 | k141_123227_41 | 49705 | 51159 | - | GH13_18 |
| TF | k141_123227 | k141_123227_42 | 51232 | 52215 | - | LacI |
| TC | k141_123227 | k141_123227_43 | 52336 | 53205 | - | 3.A.1.1.45 |
| TC | k141_123227 | k141_123227_44 | 53202 | 54080 | - | 3.A.1.1.45 |
| TC | k141_123227 | k141_123227_45 | 54192 | 55478 | - | 3.A.1.1.45 |
| TC | k141_123227 | k141_123227_46 | 55787 | 56740 | + | 8.A.5.1.4 |
Gene ID: k141_123227_40
Type: CAZyme
Location: 48626 - 49645 (+)
Type: CAZyme
Location: 48626 - 49645 (+)
Gene ID: k141_123227_41
Type: CAZyme
Location: 49705 - 51159 (-)
Type: CAZyme
Location: 49705 - 51159 (-)
Gene ID: k141_123227_42
Type: TF
Location: 51232 - 52215 (-)
Type: TF
Location: 51232 - 52215 (-)
Gene ID: k141_123227_43
Type: TC
Location: 52336 - 53205 (-)
Type: TC
Location: 52336 - 53205 (-)
Gene ID: k141_123227_44
Type: TC
Location: 53202 - 54080 (-)
Type: TC
Location: 53202 - 54080 (-)
Gene ID: k141_123227_45
Type: TC
Location: 54192 - 55478 (-)
Type: TC
Location: 54192 - 55478 (-)
Gene ID: k141_123227_46
Type: TC
Location: 55787 - 56740 (+)
Type: TC
Location: 55787 - 56740 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.