dbCAN Logo

Cluster: CGMR078421_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_123227 k141_123227_20 24711 27818 - GH38
TF k141_123227 k141_123227_21 28093 29202 + GntR
STP k141_123227 k141_123227_22 29258 30373 - Fer4
CAZyme k141_123227 k141_123227_23 30433 32853 - GH2
pfam k141_123227 k141_123227_24 33058 33351 - Glyco_hydro_95_cat
TC k141_123227 k141_123227_25 33348 34223 - 3.A.1.1.29
TC k141_123227 k141_123227_26 34239 35171 - 3.A.1.1.29
STP k141_123227 k141_123227_27 35276 37054 - SBP_bac_1
TF k141_123227 k141_123227_28 37299 38516 - HTH_AraC
TC k141_123227 k141_123227_29 38491 40290 - 8.A.59.2.1
Gene ID: k141_123227_20
Type: CAZyme
Location: 24711 - 27818 (-)
Gene ID: k141_123227_21
Type: TF
Location: 28093 - 29202 (+)
Gene ID: k141_123227_22
Type: STP
Location: 29258 - 30373 (-)
Gene ID: k141_123227_23
Type: CAZyme
Location: 30433 - 32853 (-)
Gene ID: k141_123227_24
Type: pfam
Location: 33058 - 33351 (-)
Gene ID: k141_123227_25
Type: TC
Location: 33348 - 34223 (-)
Gene ID: k141_123227_26
Type: TC
Location: 34239 - 35171 (-)
Gene ID: k141_123227_27
Type: STP
Location: 35276 - 37054 (-)
Gene ID: k141_123227_28
Type: TF
Location: 37299 - 38516 (-)
Gene ID: k141_123227_29
Type: TC
Location: 38491 - 40290 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List