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Cluster: CGMR078421_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29025 k141_29025_3 1792 3117 + 3.A.1.1.36
TC k141_29025 k141_29025_4 3219 4109 + 3.A.1.1.36
TC k141_29025 k141_29025_5 4109 4936 + 3.A.1.1.36
pfam k141_29025 k141_29025_6 4980 5942 + Acyl_transf_3 | HGSNAT_cat
CAZyme k141_29025 k141_29025_7 5967 7778 + GH2
sulfatase k141_29025 k141_29025_8 7865 9883 + S1_4
TC k141_29025 k141_29025_9 10064 11908 + 3.A.16.1.1
TF k141_29025 k141_29025_10 11924 12385 + MarR
CAZyme k141_29025 k141_29025_11 12471 14729 - GT35
Gene ID: k141_29025_3
Type: TC
Location: 1792 - 3117 (+)
Gene ID: k141_29025_4
Type: TC
Location: 3219 - 4109 (+)
Gene ID: k141_29025_5
Type: TC
Location: 4109 - 4936 (+)
Gene ID: k141_29025_6
Type: pfam
Location: 4980 - 5942 (+)
Gene ID: k141_29025_7
Type: CAZyme
Location: 5967 - 7778 (+)
Gene ID: k141_29025_8
Type: sulfatase
Location: 7865 - 9883 (+)
Gene ID: k141_29025_9
Type: TC
Location: 10064 - 11908 (+)
Gene ID: k141_29025_10
Type: TF
Location: 11924 - 12385 (+)
Gene ID: k141_29025_11
Type: CAZyme
Location: 12471 - 14729 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_29025_10 vegan > omnivore 1.03612 0.02271

🧭 Explore Read Mapping of CGC

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