Cluster: CGMR078421_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_05378
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_188858 | k141_188858_11 | 11976 | 13235 | - | GH29 |
| CAZyme | k141_188858 | k141_188858_12 | 13274 | 14893 | - | GH123 |
| pfam | k141_188858 | k141_188858_13 | 14981 | 16543 | - | SBP_bac_8 |
| TC | k141_188858 | k141_188858_14 | 16576 | 17457 | - | 3.A.1.1.10 |
| TC | k141_188858 | k141_188858_15 | 17471 | 18406 | - | 3.A.1.1.10 |
| TC | k141_188858 | k141_188858_16 | 18601 | 20376 | + | 9.B.33.1.1 |
Gene ID: k141_188858_11
Type: CAZyme
Location: 11976 - 13235 (-)
Type: CAZyme
Location: 11976 - 13235 (-)
Gene ID: k141_188858_12
Type: CAZyme
Location: 13274 - 14893 (-)
Type: CAZyme
Location: 13274 - 14893 (-)
Gene ID: k141_188858_13
Type: pfam
Location: 14981 - 16543 (-)
Type: pfam
Location: 14981 - 16543 (-)
Gene ID: k141_188858_14
Type: TC
Location: 16576 - 17457 (-)
Type: TC
Location: 16576 - 17457 (-)
Gene ID: k141_188858_15
Type: TC
Location: 17471 - 18406 (-)
Type: TC
Location: 17471 - 18406 (-)
Gene ID: k141_188858_16
Type: TC
Location: 18601 - 20376 (+)
Type: TC
Location: 18601 - 20376 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.