Cluster: CGMR078421_CGC22
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078421
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_156778 | k141_156778_2 | 951 | 2300 | - | 2.A.66.1.28 |
| peptidase | k141_156778 | k141_156778_3 | 2498 | 3721 | - | M28.UPF |
| pfam | k141_156778 | k141_156778_4 | 3919 | 5289 | + | MatE | MatE |
| CAZyme | k141_156778 | k141_156778_5 | 5601 | 7268 | + | GH13_31 |
| TF | k141_156778 | k141_156778_6 | 7265 | 8230 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_156778 | k141_156778_7 | 8251 | 9921 | + | GH13_31 |
| NULL(UNKNOWN) | k141_156778 | k141_156778_8 | 10600 | 10725 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_156778 | k141_156778_9 | 10691 | 11716 | - | 2.A.2.3.1 |
Gene ID: k141_156778_2
Type: TC
Location: 951 - 2300 (-)
Type: TC
Location: 951 - 2300 (-)
Gene ID: k141_156778_3
Type: peptidase
Location: 2498 - 3721 (-)
Type: peptidase
Location: 2498 - 3721 (-)
Gene ID: k141_156778_4
Type: pfam
Location: 3919 - 5289 (+)
Type: pfam
Location: 3919 - 5289 (+)
Gene ID: k141_156778_5
Type: CAZyme
Location: 5601 - 7268 (+)
Type: CAZyme
Location: 5601 - 7268 (+)
Gene ID: k141_156778_6
Type: TF
Location: 7265 - 8230 (+)
Type: TF
Location: 7265 - 8230 (+)
Gene ID: k141_156778_7
Type: CAZyme
Location: 8251 - 9921 (+)
Type: CAZyme
Location: 8251 - 9921 (+)
Gene ID: k141_156778_8
Type:
Location: 10600 - 10725 (-)
Type:
Location: 10600 - 10725 (-)
Gene ID: k141_156778_9
Type: TC
Location: 10691 - 11716 (-)
Type: TC
Location: 10691 - 11716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.