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Cluster: CGMR078421_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_29000 k141_29000_7 4977 6677 + 2.A.114.1.3
pfam k141_29000 k141_29000_8 6797 7273 - PAP2 | PAP2_3
TC k141_29000 k141_29000_9 7364 8725 - 2.A.66.1.33
TC k141_29000 k141_29000_10 8755 10029 - 2.A.49.9.2
pfam k141_29000 k141_29000_11 10260 10862 + Hydrolase | HAD_2
CAZyme k141_29000 k141_29000_12 11128 13152 - GH42
TC k141_29000 k141_29000_13 13191 16691 - 1.B.12.5.1
TC k141_29000 k141_29000_14 16846 18246 - 2.A.22.5.3
pfam k141_29000 k141_29000_15 18852 19841 - Asn_synthase | GMP_synt_C | NAD_synthase | tRNA_Me_trans
TC k141_29000 k141_29000_16 20387 21730 - 2.A.66.1.33
Gene ID: k141_29000_7
Type: TC
Location: 4977 - 6677 (+)
Gene ID: k141_29000_8
Type: pfam
Location: 6797 - 7273 (-)
Gene ID: k141_29000_9
Type: TC
Location: 7364 - 8725 (-)
Gene ID: k141_29000_10
Type: TC
Location: 8755 - 10029 (-)
Gene ID: k141_29000_11
Type: pfam
Location: 10260 - 10862 (+)
Gene ID: k141_29000_12
Type: CAZyme
Location: 11128 - 13152 (-)
Gene ID: k141_29000_13
Type: TC
Location: 13191 - 16691 (-)
Gene ID: k141_29000_14
Type: TC
Location: 16846 - 18246 (-)
Gene ID: k141_29000_15
Type: pfam
Location: 18852 - 19841 (-)
Gene ID: k141_29000_16
Type: TC
Location: 20387 - 21730 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_29000_12 vegan > omnivore 1.26366 0.02872
k141_29000_15 vegan > omnivore 1.01429 0.02872

🧭 Explore Read Mapping of CGC

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