Cluster: CGMR078421_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078421
- CGC Family ID: CGCFAM_00686
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_74242 | k141_74242_19 | 24903 | 25802 | - | 3.A.1.1.29 |
| TC | k141_74242 | k141_74242_20 | 25815 | 26765 | - | 3.A.1.1.29 |
| CAZyme | k141_74242 | k141_74242_21 | 26789 | 28714 | - | GH27 |
| TC | k141_74242 | k141_74242_22 | 28834 | 30402 | - | 3.A.1.1.29 |
| TF | k141_74242 | k141_74242_23 | 30591 | 32105 | - | HTH_AraC | HTH_AraC |
| STP | k141_74242 | k141_74242_24 | 32109 | 33692 | - | SBP_bac_1 |
| TC | k141_74242 | k141_74242_25 | 33689 | 35368 | - | 9.B.33.1.1 |
Gene ID: k141_74242_19
Type: TC
Location: 24903 - 25802 (-)
Type: TC
Location: 24903 - 25802 (-)
Gene ID: k141_74242_20
Type: TC
Location: 25815 - 26765 (-)
Type: TC
Location: 25815 - 26765 (-)
Gene ID: k141_74242_21
Type: CAZyme
Location: 26789 - 28714 (-)
Type: CAZyme
Location: 26789 - 28714 (-)
Gene ID: k141_74242_22
Type: TC
Location: 28834 - 30402 (-)
Type: TC
Location: 28834 - 30402 (-)
Gene ID: k141_74242_23
Type: TF
Location: 30591 - 32105 (-)
Type: TF
Location: 30591 - 32105 (-)
Gene ID: k141_74242_24
Type: STP
Location: 32109 - 33692 (-)
Type: STP
Location: 32109 - 33692 (-)
Gene ID: k141_74242_25
Type: TC
Location: 33689 - 35368 (-)
Type: TC
Location: 33689 - 35368 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens sp900066135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.