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Cluster: CGMR078406_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_274081 k141_274081_43 49716 53759 + GH2
NULL(UNKNOWN) k141_274081 k141_274081_44 53819 55045 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_274081 k141_274081_45 55252 55857 - RecO_N
TC k141_274081 k141_274081_46 55870 57252 - 3.A.1.109.4
TC k141_274081 k141_274081_47 57245 59965 - 3.A.1.109.2
NULL(UNKNOWN) k141_274081 k141_274081_48 59984 60271 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_274081 k141_274081_49 60667 61959 + 1.A.23.4.5
TC k141_274081 k141_274081_50 62079 63068 + 8.A.5.1.3
Gene ID: k141_274081_43
Type: CAZyme
Location: 49716 - 53759 (+)
Gene ID: k141_274081_44
Type:
Location: 53819 - 55045 (+)
Gene ID: k141_274081_45
Type: pfam
Location: 55252 - 55857 (-)
Gene ID: k141_274081_46
Type: TC
Location: 55870 - 57252 (-)
Gene ID: k141_274081_47
Type: TC
Location: 57245 - 59965 (-)
Gene ID: k141_274081_48
Type:
Location: 59984 - 60271 (-)
Gene ID: k141_274081_49
Type: TC
Location: 60667 - 61959 (+)
Gene ID: k141_274081_50
Type: TC
Location: 62079 - 63068 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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