Cluster: CGMR078406_CGC39
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR078406
- CGC Family ID: CGCFAM_09007
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_278264 | k141_278264_7 | 6949 | 8220 | - | GH29 |
| pfam | k141_278264 | k141_278264_8 | 8282 | 10009 | - | tRNA-synt_2b | HGTP_anticodon | tRNA_edit |
| TC | k141_278264 | k141_278264_9 | 10057 | 12708 | - | 1.B.42.1.9 |
| CAZyme | k141_278264 | k141_278264_10 | 13022 | 14779 | - | GH35 |
| TF | k141_278264 | k141_278264_11 | 15027 | 15854 | + | HTH_AraC | HTH_AraC |
| peptidase | k141_278264 | k141_278264_12 | 15988 | 17304 | + | M20.UNW |
| TC | k141_278264 | k141_278264_13 | 17446 | 18828 | + | 9.B.126.2.2 |
| TF | k141_278264 | k141_278264_14 | 18921 | 20006 | + | LacI |
| pfam | k141_278264 | k141_278264_15 | 20009 | 20764 | + | SBP_bac_10 | N_methyl |
| CAZyme | k141_278264 | k141_278264_16 | 20810 | 22576 | + | GH5 |
| sulfatase | k141_278264 | k141_278264_17 | 22816 | 23571 | + | S1_20 |
| CAZyme | k141_278264 | k141_278264_18 | 23662 | 25398 | + | GH5 |
| CAZyme | k141_278264 | k141_278264_19 | 25410 | 28019 | + | GH38 |
| TC | k141_278264 | k141_278264_20 | 28195 | 30327 | - | 9.A.8.1.6 |
Gene ID: k141_278264_7
Type: CAZyme
Location: 6949 - 8220 (-)
Type: CAZyme
Location: 6949 - 8220 (-)
Gene ID: k141_278264_8
Type: pfam
Location: 8282 - 10009 (-)
Type: pfam
Location: 8282 - 10009 (-)
Gene ID: k141_278264_9
Type: TC
Location: 10057 - 12708 (-)
Type: TC
Location: 10057 - 12708 (-)
Gene ID: k141_278264_10
Type: CAZyme
Location: 13022 - 14779 (-)
Type: CAZyme
Location: 13022 - 14779 (-)
Gene ID: k141_278264_11
Type: TF
Location: 15027 - 15854 (+)
Type: TF
Location: 15027 - 15854 (+)
Gene ID: k141_278264_12
Type: peptidase
Location: 15988 - 17304 (+)
Type: peptidase
Location: 15988 - 17304 (+)
Gene ID: k141_278264_13
Type: TC
Location: 17446 - 18828 (+)
Type: TC
Location: 17446 - 18828 (+)
Gene ID: k141_278264_14
Type: TF
Location: 18921 - 20006 (+)
Type: TF
Location: 18921 - 20006 (+)
Gene ID: k141_278264_15
Type: pfam
Location: 20009 - 20764 (+)
Type: pfam
Location: 20009 - 20764 (+)
Gene ID: k141_278264_16
Type: CAZyme
Location: 20810 - 22576 (+)
Type: CAZyme
Location: 20810 - 22576 (+)
Gene ID: k141_278264_17
Type: sulfatase
Location: 22816 - 23571 (+)
Type: sulfatase
Location: 22816 - 23571 (+)
Gene ID: k141_278264_18
Type: CAZyme
Location: 23662 - 25398 (+)
Type: CAZyme
Location: 23662 - 25398 (+)
Gene ID: k141_278264_19
Type: CAZyme
Location: 25410 - 28019 (+)
Type: CAZyme
Location: 25410 - 28019 (+)
Gene ID: k141_278264_20
Type: TC
Location: 28195 - 30327 (-)
Type: TC
Location: 28195 - 30327 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp944390735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.