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Cluster: CGMR078406_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_189226 k141_189226_25 31873 32598 + 3.A.1.104.1
TC k141_189226 k141_189226_26 32588 33910 + 3.A.1.103.6
pfam k141_189226 k141_189226_27 33907 35568 + Methyltransf_23
pfam k141_189226 k141_189226_28 35565 36785 + Glycos_transf_1 | Glyco_trans_1_4
CAZyme k141_189226 k141_189226_29 36789 37736 + GT2
CAZyme k141_189226 k141_189226_30 37770 39530 + GT2
CAZyme k141_189226 k141_189226_31 39527 40621 + GT2
pfam k141_189226 k141_189226_32 40635 42773 - DEAD | DEAD_2 | Helicase_C_2
pfam k141_189226 k141_189226_33 42897 44078 - Chorismate_synt
CAZyme k141_189226 k141_189226_34 44291 46498 + CBM67 | GH78
TC k141_189226 k141_189226_35 47097 47897 - 3.A.1.15.8
Gene ID: k141_189226_25
Type: TC
Location: 31873 - 32598 (+)
Gene ID: k141_189226_26
Type: TC
Location: 32588 - 33910 (+)
Gene ID: k141_189226_27
Type: pfam
Location: 33907 - 35568 (+)
Gene ID: k141_189226_28
Type: pfam
Location: 35565 - 36785 (+)
Gene ID: k141_189226_29
Type: CAZyme
Location: 36789 - 37736 (+)
Gene ID: k141_189226_30
Type: CAZyme
Location: 37770 - 39530 (+)
Gene ID: k141_189226_31
Type: CAZyme
Location: 39527 - 40621 (+)
Gene ID: k141_189226_32
Type: pfam
Location: 40635 - 42773 (-)
Gene ID: k141_189226_33
Type: pfam
Location: 42897 - 44078 (-)
Gene ID: k141_189226_34
Type: CAZyme
Location: 44291 - 46498 (+)
Gene ID: k141_189226_35
Type: TC
Location: 47097 - 47897 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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