Cluster: CGMR078406_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR078406
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_293077 | k141_293077_101 | 114235 | 116205 | + | GH42 |
| CAZyme | k141_293077 | k141_293077_102 | 116372 | 117472 | - | GH172 |
| pfam | k141_293077 | k141_293077_103 | 117475 | 120087 | - | GH123_N |
| TC | k141_293077 | k141_293077_104 | 120127 | 122004 | - | 3.A.1.1.39 |
| TC | k141_293077 | k141_293077_105 | 122021 | 124678 | - | 3.A.1.1.7 |
Gene ID: k141_293077_101
Type: CAZyme
Location: 114235 - 116205 (+)
Type: CAZyme
Location: 114235 - 116205 (+)
Gene ID: k141_293077_102
Type: CAZyme
Location: 116372 - 117472 (-)
Type: CAZyme
Location: 116372 - 117472 (-)
Gene ID: k141_293077_103
Type: pfam
Location: 117475 - 120087 (-)
Type: pfam
Location: 117475 - 120087 (-)
Gene ID: k141_293077_104
Type: TC
Location: 120127 - 122004 (-)
Type: TC
Location: 120127 - 122004 (-)
Gene ID: k141_293077_105
Type: TC
Location: 122021 - 124678 (-)
Type: TC
Location: 122021 - 124678 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Lentisphaeria
Order
Victivallales
Family
UBA1829
Genus
UBA1829
Species
UBA1829 sp944390735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.