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Cluster: CGMR078406_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_293077 k141_293077_60 70324 72063 + 3.A.2.3.3
TC k141_293077 k141_293077_61 72056 73348 + 3.A.2.3.3
TC k141_293077 k141_293077_62 73366 73974 + 3.A.2.3.3
TC k141_293077 k141_293077_63 73971 75845 + 3.A.2.3.3
TC k141_293077 k141_293077_64 75842 76384 + 3.A.2.3.3
CAZyme k141_293077 k141_293077_65 76520 77734 + CE7
pfam k141_293077 k141_293077_66 77747 78568 + Kdo
TC k141_293077 k141_293077_67 78565 80715 + 3.A.11.1.1
Gene ID: k141_293077_60
Type: TC
Location: 70324 - 72063 (+)
Gene ID: k141_293077_61
Type: TC
Location: 72056 - 73348 (+)
Gene ID: k141_293077_62
Type: TC
Location: 73366 - 73974 (+)
Gene ID: k141_293077_63
Type: TC
Location: 73971 - 75845 (+)
Gene ID: k141_293077_64
Type: TC
Location: 75842 - 76384 (+)
Gene ID: k141_293077_65
Type: CAZyme
Location: 76520 - 77734 (+)
Gene ID: k141_293077_66
Type: pfam
Location: 77747 - 78568 (+)
Gene ID: k141_293077_67
Type: TC
Location: 78565 - 80715 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_293077_60 vegetarian > vegan 1.31541 0.03181
k141_293077_61 vegetarian > vegan 1.03822 0.03181

🧭 Explore Read Mapping of CGC

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