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Cluster: CGMR078406_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_314999 k141_314999_10 8348 10003 + 2.A.9.3.7
pfam k141_314999 k141_314999_11 10039 10788 + R3H | KH_2 | KH_KhpA-B
pfam k141_314999 k141_314999_12 10811 12037 + Metalloenzyme | PhosphMutase
CAZyme k141_314999 k141_314999_13 12760 15027 + GH2
pfam k141_314999 k141_314999_14 15169 16440 + GARS_A | GARS_C | GARS_N
CAZyme k141_314999 k141_314999_15 16446 17606 + GT4
pfam k141_314999 k141_314999_16 17582 18403 + NAD_synthase
TC k141_314999 k141_314999_17 18520 19836 + 9.A.40.2.1
pfam k141_314999 k141_314999_18 20035 21477 - GatB_Yqey | GatB_N
TF k141_314999 k141_314999_19 21699 22625 - HTH_AraC
CAZyme k141_314999 k141_314999_20 22780 24117 + GH10
Gene ID: k141_314999_10
Type: TC
Location: 8348 - 10003 (+)
Gene ID: k141_314999_11
Type: pfam
Location: 10039 - 10788 (+)
Gene ID: k141_314999_12
Type: pfam
Location: 10811 - 12037 (+)
Gene ID: k141_314999_13
Type: CAZyme
Location: 12760 - 15027 (+)
Gene ID: k141_314999_14
Type: pfam
Location: 15169 - 16440 (+)
Gene ID: k141_314999_15
Type: CAZyme
Location: 16446 - 17606 (+)
Gene ID: k141_314999_16
Type: pfam
Location: 17582 - 18403 (+)
Gene ID: k141_314999_17
Type: TC
Location: 18520 - 19836 (+)
Gene ID: k141_314999_18
Type: pfam
Location: 20035 - 21477 (-)
Gene ID: k141_314999_19
Type: TF
Location: 21699 - 22625 (-)
Gene ID: k141_314999_20
Type: CAZyme
Location: 22780 - 24117 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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