Cluster: CGMR078337_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078337
- CGC Family ID: CGCFAM_08241
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33819 | k141_33819_23 | 20017 | 20592 | - | 1.A.34.1.1 |
| TC | k141_33819 | k141_33819_24 | 20840 | 22180 | + | 2.A.66.1.33 |
| CAZyme | k141_33819 | k141_33819_25 | 22453 | 23610 | - | GH27 |
| pfam | k141_33819 | k141_33819_26 | 23779 | 25206 | - | PK | PK_C |
| TF | k141_33819 | k141_33819_27 | 25607 | 25990 | + | GntR |
| TC | k141_33819 | k141_33819_28 | 25987 | 26889 | + | 3.A.1.132.1 |
Gene ID: k141_33819_23
Type: TC
Location: 20017 - 20592 (-)
Type: TC
Location: 20017 - 20592 (-)
Gene ID: k141_33819_24
Type: TC
Location: 20840 - 22180 (+)
Type: TC
Location: 20840 - 22180 (+)
Gene ID: k141_33819_25
Type: CAZyme
Location: 22453 - 23610 (-)
Type: CAZyme
Location: 22453 - 23610 (-)
Gene ID: k141_33819_26
Type: pfam
Location: 23779 - 25206 (-)
Type: pfam
Location: 23779 - 25206 (-)
Gene ID: k141_33819_27
Type: TF
Location: 25607 - 25990 (+)
Type: TF
Location: 25607 - 25990 (+)
Gene ID: k141_33819_28
Type: TC
Location: 25987 - 26889 (+)
Type: TC
Location: 25987 - 26889 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Species
Fumia sp902493155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.