Cluster: CGMR078337_CGC18
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate: alpha-glucan
- Genome ID: CGMR078337
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_65357 | k141_65357_31 | 39477 | 40211 | - | 3.A.1.3.15 |
| TC | k141_65357 | k141_65357_32 | 40198 | 40887 | - | 3.A.1.3.15 |
| TC | k141_65357 | k141_65357_33 | 41036 | 41881 | - | 3.A.1.3.27 |
| TC | k141_65357 | k141_65357_34 | 42148 | 44334 | - | 3.A.1.106.2 |
| pfam | k141_65357 | k141_65357_35 | 44371 | 44856 | - | DUF1854 |
| TC | k141_65357 | k141_65357_36 | 44911 | 47184 | - | 3.A.1.135.5 |
| CAZyme | k141_65357 | k141_65357_37 | 47408 | 49894 | - | GT35 |
| CAZyme | k141_65357 | k141_65357_38 | 50028 | 51449 | - | GT5 |
| pfam | k141_65357 | k141_65357_39 | 51507 | 52625 | - | NTP_transferase | Hexapep_GlmU |
| pfam | k141_65357 | k141_65357_40 | 52662 | 53870 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | k141_65357 | k141_65357_41 | 53937 | 56102 | - | CBM48 | GH13_9 |
| CAZyme | k141_65357 | k141_65357_42 | 56508 | 58355 | + | GH13_39 |
Gene ID: k141_65357_31
Type: TC
Location: 39477 - 40211 (-)
Type: TC
Location: 39477 - 40211 (-)
Gene ID: k141_65357_32
Type: TC
Location: 40198 - 40887 (-)
Type: TC
Location: 40198 - 40887 (-)
Gene ID: k141_65357_33
Type: TC
Location: 41036 - 41881 (-)
Type: TC
Location: 41036 - 41881 (-)
Gene ID: k141_65357_34
Type: TC
Location: 42148 - 44334 (-)
Type: TC
Location: 42148 - 44334 (-)
Gene ID: k141_65357_35
Type: pfam
Location: 44371 - 44856 (-)
Type: pfam
Location: 44371 - 44856 (-)
Gene ID: k141_65357_36
Type: TC
Location: 44911 - 47184 (-)
Type: TC
Location: 44911 - 47184 (-)
Gene ID: k141_65357_37
Type: CAZyme
Location: 47408 - 49894 (-)
Type: CAZyme
Location: 47408 - 49894 (-)
Gene ID: k141_65357_38
Type: CAZyme
Location: 50028 - 51449 (-)
Type: CAZyme
Location: 50028 - 51449 (-)
Gene ID: k141_65357_39
Type: pfam
Location: 51507 - 52625 (-)
Type: pfam
Location: 51507 - 52625 (-)
Gene ID: k141_65357_40
Type: pfam
Location: 52662 - 53870 (-)
Type: pfam
Location: 52662 - 53870 (-)
Gene ID: k141_65357_41
Type: CAZyme
Location: 53937 - 56102 (-)
Type: CAZyme
Location: 53937 - 56102 (-)
Gene ID: k141_65357_42
Type: CAZyme
Location: 56508 - 58355 (+)
Type: CAZyme
Location: 56508 - 58355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Species
Fumia sp902493155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.