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Cluster: CGMR078076_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12896 k141_12896_50 55215 57875 - 3.A.7.7.1
NULL(UNKNOWN) k141_12896 k141_12896_51 58093 58617 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_12896 k141_12896_52 58862 59377 + DUF2799
TC k141_12896 k141_12896_53 59548 59949 - 1.A.30.2.7
TC k141_12896 k141_12896_54 60022 60678 - 1.A.30.2.2
pfam k141_12896 k141_12896_55 60840 61988 - TonB_C
STP k141_12896 k141_12896_56 62278 63339 + Peripla_BP_2
TC k141_12896 k141_12896_57 63418 64503 + 3.A.1.14.7
TC k141_12896 k141_12896_58 64676 65626 + 3.A.1.14.1
TC k141_12896 k141_12896_59 65672 66433 + 3.A.1.14.3
pfam k141_12896 k141_12896_60 66357 67883 - PepSY_TM
STP k141_12896 k141_12896_61 68218 68871 - TetR_N
TC k141_12896 k141_12896_62 69120 69641 + 9.B.35.1.3
pfam k141_12896 k141_12896_63 69714 70082 + Transthyretin
TC k141_12896 k141_12896_64 70447 71781 + 9.B.43.1.1
CAZyme k141_12896 k141_12896_65 72333 73316 + CE4
pfam k141_12896 k141_12896_66 73638 74171 + Ureidogly_lyase
TC k141_12896 k141_12896_67 74239 74982 - 3.A.1.3.28
TC k141_12896 k141_12896_68 75049 75771 - 3.A.1.3.28
TC k141_12896 k141_12896_69 75768 76601 - 3.A.1.3.28
pfam k141_12896 k141_12896_70 76959 77555 - PepSY | PepSY
NULL(UNKNOWN) k141_12896 k141_12896_71 77769 78620 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_12896 k141_12896_72 78636 79589 - GT27
NULL(UNKNOWN) k141_12896 k141_12896_73 79648 80874 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_12896 k141_12896_74 80912 82138 - GT4
CAZyme k141_12896 k141_12896_75 82209 83843 - GT2
Gene ID: k141_12896_50
Type: TC
Location: 55215 - 57875 (-)
Gene ID: k141_12896_51
Type:
Location: 58093 - 58617 (-)
Gene ID: k141_12896_52
Type: pfam
Location: 58862 - 59377 (+)
Gene ID: k141_12896_53
Type: TC
Location: 59548 - 59949 (-)
Gene ID: k141_12896_54
Type: TC
Location: 60022 - 60678 (-)
Gene ID: k141_12896_55
Type: pfam
Location: 60840 - 61988 (-)
Gene ID: k141_12896_56
Type: STP
Location: 62278 - 63339 (+)
Gene ID: k141_12896_57
Type: TC
Location: 63418 - 64503 (+)
Gene ID: k141_12896_58
Type: TC
Location: 64676 - 65626 (+)
Gene ID: k141_12896_59
Type: TC
Location: 65672 - 66433 (+)
Gene ID: k141_12896_60
Type: pfam
Location: 66357 - 67883 (-)
Gene ID: k141_12896_61
Type: STP
Location: 68218 - 68871 (-)
Gene ID: k141_12896_62
Type: TC
Location: 69120 - 69641 (+)
Gene ID: k141_12896_63
Type: pfam
Location: 69714 - 70082 (+)
Gene ID: k141_12896_64
Type: TC
Location: 70447 - 71781 (+)
Gene ID: k141_12896_65
Type: CAZyme
Location: 72333 - 73316 (+)
Gene ID: k141_12896_66
Type: pfam
Location: 73638 - 74171 (+)
Gene ID: k141_12896_67
Type: TC
Location: 74239 - 74982 (-)
Gene ID: k141_12896_68
Type: TC
Location: 75049 - 75771 (-)
Gene ID: k141_12896_69
Type: TC
Location: 75768 - 76601 (-)
Gene ID: k141_12896_70
Type: pfam
Location: 76959 - 77555 (-)
Gene ID: k141_12896_71
Type:
Location: 77769 - 78620 (+)
Gene ID: k141_12896_72
Type: CAZyme
Location: 78636 - 79589 (-)
Gene ID: k141_12896_73
Type:
Location: 79648 - 80874 (-)
Gene ID: k141_12896_74
Type: CAZyme
Location: 80912 - 82138 (-)
Gene ID: k141_12896_75
Type: CAZyme
Location: 82209 - 83843 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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